Information for 3-GCCTCCCCTGCTGGCA (Motif 9)

A C T G A G T C G T A C A C G T A G T C G T A C A G T C A G T C A C G T T A C G A G T C A C G T A C T G A C T G A T G C C T G A
Reverse Opposite:
A G C T A T C G A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C T G A C T G A C T G G T C A A C T G A C T G A G T C
p-value:1e-11
log p-value:-2.542e+01
Information Content per bp:1.877
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.4 +/- 11.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GCCTCCCCTGCTGGCA
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C A C G T A G T C G T A C A G T C A G T C A C G T T A C G A G T C A C G T A C T G A C T G A T G C C T G A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCCCCTGCTGGCA-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C T G A G T C G T A C A C G T A G T C G T A C A G T C A G T C A C G T T A C G A G T C A C G T A C T G A C T G A T G C C T G A A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GCCTCCCCTGCTGGCA
---CCCCCTGCTGTG-
 A C T G A G T C G T A C A C G T A G T C G T A C A G T C A G T C A C G T T A C G A G T C A C G T A C T G A C T G A T G C C T G A
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCCTCCCCTGCTGGCA--
---TCNCCTGCTGNGNNN
 A C T G A G T C G T A C A C G T A G T C G T A C A G T C A G T C A C G T T A C G A G T C A C G T A C T G A C T G A T G C C T G A A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCCTCCCCTGCTGGCA
-GGCCYCCTGCTGDGH
 A C T G A G T C G T A C A C G T A G T C G T A C A G T C A G T C A C G T T A C G A G T C A C G T A C T G A C T G A T G C C T G A
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCTCCCCTGCTGGCA-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C T G A G T C G T A C A C G T A G T C G T A C A G T C A G T C A C G T T A C G A G T C A C G T A C T G A C T G A T G C C T G A A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCCTCCCCTGCTGGCA--
---TNTCCTGCTGTGNNG
 A C T G A G T C G T A C A C G T A G T C G T A C A G T C A G T C A C G T T A C G A G T C A C G T A C T G A C T G A T G C C T G A A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCTCCCCTGCTGGCA
-CCTCACCTG------
 A C T G A G T C G T A C A C G T A G T C G T A C A G T C A G T C A C G T T A C G A G T C A C G T A C T G A C T G A T G C C T G A
A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCTCCCCTGCTGGCA
-SNGCACCTGCHS---
 A C T G A G T C G T A C A C G T A G T C G T A C A G T C A G T C A C G T T A C G A G T C A C G T A C T G A C T G A T G C C T G A
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GCCTCCCCTGCTGGCA
------CCTGCTGAGH
 A C T G A G T C G T A C A C G T A G T C G T A C A G T C A G T C A C G T T A C G A G T C A C G T A C T G A C T G A T G C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A