Information for 2-RGCAGRTRGMGRCAGS (Motif 6)

C T G A C T A G A G T C C G T A A C T G T C A G A C G T C T A G A C T G G T C A A T C G T C A G G T A C C G T A A C T G A T G C
Reverse Opposite:
T A C G G T A C A C G T A C T G A G T C A T G C C A G T A G T C A G T C C G T A A G T C A G T C A C G T A C T G A G T C A G C T
p-value:1e-11
log p-value:-2.719e+01
Information Content per bp:1.814
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.8 +/- 20.7bp
Average Position of motif in Background45.5 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:RGCAGRTRGMGRCAGS
AACAGATGGC------
 C T G A C T A G A G T C C G T A A C T G T C A G A C G T C T A G A C T G G T C A A T C G T C A G G T A C C G T A A C T G A T G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-RGCAGRTRGMGRCAGS
SDGCAGGTGCNS-----
 A C G T C T G A C T A G A G T C C G T A A C T G T C A G A C G T C T A G A C T G G T C A A T C G T C A G G T A C C G T A A C T G A T G C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:RGCAGRTRGMGRCAGS
AACAGATGGT------
 C T G A C T A G A G T C C G T A A C T G T C A G A C G T C T A G A C T G G T C A A T C G T C A G G T A C C G T A A C T G A T G C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:RGCAGRTRGMGRCAGS
AACAGGTGT-------
 C T G A C T A G A G T C C G T A A C T G T C A G A C G T C T A G A C T G G T C A A T C G T C A G G T A C C G T A A C T G A T G C
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:RGCAGRTRGMGRCAGS
NNCAGGTGNN------
 C T G A C T A G A G T C C G T A A C T G T C A G A C G T C T A G A C T G G T C A A T C G T C A G G T A C C G T A A C T G A T G C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RGCAGRTRGMGRCAGS
-VCAGGTRDRY-----
 C T G A C T A G A G T C C G T A A C T G T C A G A C G T C T A G A C T G G T C A A T C G T C A G G T A C C G T A A C T G A T G C
A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--RGCAGRTRGMGRCAGS
VNAVCAGCTGGC------
 A C G T A C G T C T G A C T A G A G T C C G T A A C T G T C A G A C G T C T A G A C T G G T C A A T C G T C A G G T A C C G T A A C T G A T G C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---RGCAGRTRGMGRCAGS
CACGGCAGTTGGTNN----
 A C G T A C G T A C G T C T G A C T A G A G T C C G T A A C T G T C A G A C G T C T A G A C T G G T C A A T C G T C A G G T A C C G T A A C T G A T G C
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RGCAGRTRGMGRCAGS
AACAKATGGY------
 C T G A C T A G A G T C C G T A A C T G T C A G A C G T C T A G A C T G G T C A A T C G T C A G G T A C C G T A A C T G A T G C
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:RGCAGRTRGMGRCAGS
GACAGCTGCAG-----
 C T G A C T A G A G T C C G T A A C T G T C A G A C G T C T A G A C T G G T C A A T C G T C A G G T A C C G T A A C T G A T G C
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T