Information for 4-AGAGGGCGCTGTT (Motif 3)

G C T A A C T G C T G A A C T G A C T G A C T G G A T C A C T G G T A C A C G T A T C G A C G T C A G T
Reverse Opposite:
G C T A T C G A A T G C C G T A A C T G A G T C C A T G A G T C A G T C A G T C A G C T G T A C C A G T
p-value:1e-21
log p-value:-4.887e+01
Information Content per bp:1.804
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif33.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets61.4 +/- 19.0bp
Average Position of motif in Background51.7 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------AGAGGGCGCTGTT-
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C T G A C T G A C T G G A T C A C T G G T A C A C G T A T C G A C G T C A G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGGCGCTGTT
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C T G A C T G A C T G G A T C A C T G G T A C A C G T A T C G A C G T C A G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0039.1_Klf7_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGAGGGCGCTGTT--
NNAGGGGCGGGGTNNA
 A C G T G C T A A C T G C T G A A C T G A C T G A C T G G A T C A C T G G T A C A C G T A T C G A C G T C A G T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGAGGGCGCTGTT------
--AAGACGCTGTAAAGCGA
 G C T A A C T G C T G A A C T G A C T G A C T G G A T C A C T G G T A C A C G T A T C G A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGAGGGCGCTGTT------
--AAGACGCTGTAAAGCGA
 G C T A A C T G C T G A A C T G A C T G A C T G G A T C A C T G G T A C A C G T A T C G A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGAGGGCGCTGTT
----GGCGCGCT-
 G C T A A C T G C T G A A C T G A C T G A C T G G A T C A C T G G T A C A C G T A T C G A C G T C A G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGAGGGCGCTGTT------
--AGGACGCTGTAAAGGGA
 G C T A A C T G C T G A A C T G A C T G A C T G G A T C A C T G G T A C A C G T A T C G A C G T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGAGGGCGCTGTT
RGKGGGCGGAGC-
 G C T A A C T G C T G A A C T G A C T G A C T G G A T C A C T G G T A C A C G T A T C G A C G T C A G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGCGCTGTT--
TTGGGGGCGCCCCTAG
 A C G T G C T A A C T G C T G A A C T G A C T G A C T G G A T C A C T G G T A C A C G T A T C G A C G T C A G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

SP4/MA0685.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGAGGGCGCTGTT--
NAAGGGGGCGTGGCTTN
 A C G T A C G T G C T A A C T G C T G A A C T G A C T G A C T G G A T C A C T G G T A C A C G T A T C G A C G T C A G T A C G T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A