Information for 13-ATGACTGATG (Motif 26)

C G T A A C G T A T C G C G T A A G T C A C G T A C T G C G T A A C G T A T C G
Reverse Opposite:
A T G C C G T A A C G T A G T C C G T A A C T G A C G T A T G C C G T A A C G T
p-value:1e-6
log p-value:-1.511e+01
Information Content per bp:1.935
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets68.8 +/- 25.5bp
Average Position of motif in Background47.9 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFE2/MA0841.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-ATGACTGATG
CATGACTCATC
 A C G T C G T A A C G T A T C G C G T A A G T C A C G T A C T G C G T A A C G T A T C G
T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C

JDP2/MA0655.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:ATGACTGATG
ATGACTCAT-
 C G T A A C G T A T C G C G T A A G T C A C G T A C T G C G T A A C G T A T C G
T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-ATGACTGATG-
TTTGATTGATGN
 A C G T C G T A A C G T A T C G C G T A A G T C A C G T A C T G C G T A A C G T A T C G A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

JUND/MA0491.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ATGACTGATG
GGTGACTCATC
 A C G T C G T A A C G T A T C G C G T A A G T C A C G T A C T G C G T A A C G T A T C G
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ATGACTGATG--
ATGATKGATGRC
 C G T A A C G T A T C G C G T A A G T C A C G T A C T G C G T A A C G T A T C G A C G T A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ATGACTGATG-
-TGATTGATGA
 C G T A A C G T A T C G C G T A A G T C A C G T A C T G C G T A A C G T A T C G A C G T
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ATGACTGATG
GGATGACTCATC
 A C G T A C G T C G T A A C G T A T C G C G T A A G T C A C G T A C T G C G T A A C G T A T C G
C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ATGACTGATG---
-TGATTRATGGCY
 C G T A A C G T A T C G C G T A A G T C A C G T A C T G C G T A A C G T A T C G A C G T A C G T A C G T
A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

PB0144.1_Lef1_2/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ATGACTGATG---
NNANTGATTGATNTTN
 A C G T A C G T A C G T C G T A A C G T A T C G C G T A A G T C A C G T A C T G C G T A A C G T A T C G A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATGACTGATG-
DATGASTCATNN
 A C G T C G T A A C G T A T C G C G T A A G T C A C G T A C T G C G T A A C G T A T C G A C G T
C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C