Information for 11-CCTATGTGTA (Motif 24)

A G T C A T G C A C G T C G T A A C G T A C T G A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A A G T C C G T A A C G T C G T A A T C G A C T G
p-value:1e-7
log p-value:-1.692e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.0 +/- 30.9bp
Average Position of motif in Background87.2 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCTATGTGTA
ACCATATGTT--
 A C G T A C G T A G T C A T G C A C G T C G T A A C G T A C T G A C G T A C T G A C G T C G T A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCTATGTGTA
CCATATGT---
 A C G T A G T C A T G C A C G T C G T A A C G T A C T G A C G T A C T G A C G T C G T A
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCTATGTGTA----
NNNNTTTGTTTACNNT
 A C G T A C G T A G T C A T G C A C G T C G T A A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

PB0026.1_Gm397_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCTATGTGTA------
NNGTATGTGCACATNNN
 A C G T A G T C A T G C A C G T C G T A A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCTATGTGTA---
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A G T C A T G C A C G T C G T A A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCTATGTGTA
ACCATATGGT--
 A C G T A C G T A G T C A T G C A C G T C G T A A C G T A C T G A C G T A C T G A C G T C G T A
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCTATGTGTA-
---TTGTTTAC
 A G T C A T G C A C G T C G T A A C G T A C T G A C G T A C T G A C G T C G T A A C G T
A C G T A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

BHLHE23/MA0817.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCTATGTGTA
NAACATATGTTT-
 A C G T A C G T A C G T A G T C A T G C A C G T C G T A A C G T A C T G A C G T A C T G A C G T C G T A
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTATGTGTA------
NTNTATGTGCACATNNN
 A C G T A G T C A T G C A C G T C G T A A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

FOXD1/MA0031.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCTATGTGTA-
---ATGTTTAC
 A G T C A T G C A C G T C G T A A C G T A C T G A C G T A C T G A C G T C G T A A C G T
A C G T A C G T A C G T G C T A A C G T C A T G A C G T A C G T A C G T C G T A A G T C