Information for 10-GCTTATGCCT (Motif 23)

A C T G A G T C A C G T A G C T C G T A A G C T A C T G A T G C A G T C A C G T
Reverse Opposite:
C G T A A C T G A T C G A G T C C T G A A C G T C T G A C G T A A C T G A G T C
p-value:1e-7
log p-value:-1.692e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.5 +/- 24.9bp
Average Position of motif in Background63.4 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTTATGCCT
GHATATKCAT
 A C T G A G T C A C G T A G C T C G T A A G C T A C T G A T G C A G T C A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCTTATGCCT-
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A C T G A G T C A C G T A G C T C G T A A G C T A C T G A T G C A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTTATGCCT
--CNAGGCCT
 A C T G A G T C A C G T A G C T C G T A A G C T A C T G A T G C A G T C A C G T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCTTATGCCT-----
TNNATTATGCATANNTT
 A C G T A C G T A C T G A G T C A C G T A G C T C G T A A G C T A C T G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

NEUROD2/MA0668.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTTATGCCT
ACCATATGGC-
 A C G T A C T G A G T C A C G T A G C T C G T A A G C T A C T G A T G C A G T C A C G T
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTTATGCCT
GAATATTCAT
 A C T G A G T C A C G T A G C T C G T A A G C T A C T G A T G C A G T C A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

NEUROG2/MA0669.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCTTATGCCT
AACATATGTC-
 A C G T A C T G A G T C A C G T A G C T C G T A A G C T A C T G A T G C A G T C A C G T
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTTATGCCT
ANCATATGGT-
 A C G T A C T G A G T C A C G T A G C T C G T A A G C T A C T G A T G C A G T C A C G T
C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTTATGCCT
NGCTN------
 A C G T A C T G A G T C A C G T A G C T C G T A A G C T A C T G A T G C A G T C A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCTTATGCCT
AATTTGCTGAC----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G C T C G T A A G C T A C T G A T G C A G T C A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T