Information for 19-CCACAYVTAMTGC (Motif 21)

A G T C A G T C C G T A A G T C C G T A A G C T T G A C C G A T T G C A G T C A A C G T A T C G A G T C
Reverse Opposite:
A C T G A T G C G T C A A C G T A C G T C G T A A C T G C T G A C G A T A C T G A C G T A C T G A C T G
p-value:1e-7
log p-value:-1.749e+01
Information Content per bp:1.762
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif103.7
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets46.9 +/- 20.2bp
Average Position of motif in Background52.4 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCACAYVTAMTGC
ATCCAC---------
 A C G T A C G T A G T C A G T C C G T A A G T C C G T A A G C T T G A C C G A T T G C A G T C A A C G T A T C G A G T C
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCACAYVTAMTGC
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A G C T T G A C C G A T T G C A G T C A A C G T A T C G A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCACAYVTAMTGC
ACCACTTGAA----
 A C G T A G T C A G T C C G T A A G T C C G T A A G C T T G A C C G A T T G C A G T C A A C G T A T C G A G T C
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCACAYVTAMTGC
TAAGCCACTTAACATT-
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A G C T T G A C C G A T T G C A G T C A A C G T A T C G A G T C
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCACAYVTAMTGC
TAAGCCACTTGAATTT-
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A G C T T G A C C G A T T G C A G T C A A C G T A T C G A G T C
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCACAYVTAMTGC
AAACCACANN------
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A G C T T G A C C G A T T G C A G T C A A C G T A T C G A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCACAYVTAMTGC
AAACCACAGC------
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A G C T T G A C C G A T T G C A G T C A A C G T A T C G A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCACAYVTAMTGC
AAACCACAGAN-----
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A G C T T G A C C G A T T G C A G T C A A C G T A T C G A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCACAYVTAMTGC
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A G C T T G A C C G A T T G C A G T C A A C G T A T C G A G T C
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCACAYVTAMTGC
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A G C T T G A C C G A T T G C A G T C A A C G T A T C G A G T C
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T