Information for 6-GCCTTTGCGTGTG (Motif 7)

C T A G A G T C A G T C A C G T A G C T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A A G T C A C T G A G T C C G T A C T G A C G T A A C T G A C T G A G T C
p-value:1e-8
log p-value:-1.968e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.8 +/- 29.5bp
Average Position of motif in Background61.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GCCTTTGCGTGTG-
----TTGCGTGCVA
 C T A G A G T C A G T C A C G T A G C T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GCCTTTGCGTGTG
-----TGCGTG--
 C T A G A G T C A G T C A C G T A G C T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCTTTGCGTGTG
TTCATTTGCATAT-
 A C G T C T A G A G T C A G T C A C G T A G C T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCTTTGCGTGTG
--ATTTGCATAT-
 C T A G A G T C A G T C A C G T A G C T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C T G
A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCCTTTGCGTGTG--
-----TGGGTGTGGC
 C T A G A G T C A G T C A C G T A G C T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCCTTTGCGTGTG---
----NTGGGTGTGGCC
 C T A G A G T C A G T C A C G T A G C T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTTGCGTGTG
ATGCCCGGGCATGT-
 A C G T A C G T C T A G A G T C A G T C A C G T A G C T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C T G
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GCCTTTGCGTGTG---
-----TGGGTGTGGCN
 C T A G A G T C A G T C A C G T A G C T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTTGCGTGTG-
ANTCCTTTGTCTNNNN
 A C G T A C G T C T A G A G T C A G T C A C G T A G C T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C T G A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCCTTTGCGTGTG---
-----TGCGTGGGCGT
 C T A G A G T C A G T C A C G T A G C T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T