Information for 2-CTCAGTGCTGCCACCW (Motif 4)

A G T C A C G T A T G C G C T A A T C G G A C T A C T G T G A C C G A T A C T G A G T C A G T C C G T A A T G C A G T C C G T A
Reverse Opposite:
G C A T C T A G T A C G C G A T C T A G C T A G A G T C C G T A A C T G G T A C C G T A T A G C C G A T A T C G C G T A A C T G
p-value:1e-20
log p-value:-4.769e+01
Information Content per bp:1.772
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.5 +/- 20.4bp
Average Position of motif in Background62.1 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTCAGTGCTGCCACCW
-----VGCTGWCAVB-
 A G T C A C G T A T G C G C T A A T C G G A C T A C T G T G A C C G A T A C T G A G T C A G T C C G T A A T G C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CTCAGTGCTGCCACCW
-------ATGCCAACC
 A G T C A C G T A T G C G C T A A T C G G A C T A C T G T G A C C G A T A C T G A G T C A G T C C G T A A T G C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTCAGTGCTGCCACCW
---GGTGYTGACAGS-
 A G T C A C G T A T G C G C T A A T C G G A C T A C T G T G A C C G A T A C T G A G T C A G T C C G T A A T G C A G T C C G T A
A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTCAGTGCTGCCACCW
-TGACAGCTGTCA---
 A G T C A C G T A T G C G C T A A T C G G A C T A C T G T G A C C G A T A C T G A G T C A G T C C G T A A T G C A G T C C G T A
A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTCAGTGCTGCCACCW
-TGACAGGTGTCA---
 A G T C A C G T A T G C G C T A A T C G G A C T A C T G T G A C C G A T A C T G A G T C A G T C C G T A A T G C A G T C C G T A
A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTCAGTGCTGCCACCW----
----ACTATGCCAACCTACC
 A G T C A C G T A T G C G C T A A T C G G A C T A C T G T G A C C G A T A C T G A G T C A G T C C G T A A T G C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CTCAGTGCTGCCACCW
--------TGTCANYT
 A G T C A C G T A T G C G C T A A T C G G A C T A C T G T G A C C G A T A C T G A G T C A G T C C G T A A T G C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:CTCAGTGCTGCCACCW
--------TGACACCT
 A G T C A C G T A T G C G C T A A T C G G A C T A C T G T G A C C G A T A C T G A G T C A G T C C G T A A T G C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

TGIF2/MA0797.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTCAGTGCTGCCACCW
-TGACAGCTGTCA---
 A G T C A C G T A T G C G C T A A T C G G A C T A C T G T G A C C G A T A C T G A G T C A G T C C G T A A T G C A G T C C G T A
A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTCAGTGCTGCCACCW
-TGACAGGTGTCA---
 A G T C A C G T A T G C G C T A A T C G G A C T A C T G T G A C C G A T A C T G A G T C A G T C C G T A A T G C A G T C C G T A
A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T A C G T A C G T