Information for 3-GCCAACAGGT (Motif 2)

T A C G G A T C G T A C C G T A G T C A A G T C C G T A T A C G A C T G A C G T
Reverse Opposite:
T G C A T G A C A T G C C G A T T C A G C A G T A C G T C A T G C T A G A T G C
p-value:1e-51
log p-value:-1.187e+02
Information Content per bp:1.614
Number of Target Sequences with motif156.0
Percentage of Target Sequences with motif20.23%
Number of Background Sequences with motif2278.8
Percentage of Background Sequences with motif4.81%
Average Position of motif in Targets46.8 +/- 22.5bp
Average Position of motif in Background51.2 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCCAACAGGT
CGTGCCAAG----
 A C G T A C G T A C G T T A C G G A T C G T A C C G T A G T C A A G T C C G T A T A C G A C T G A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCCAACAGGT
TGCCAA-----
 A C G T T A C G G A T C G T A C C G T A G T C A A G T C C G T A T A C G A C T G A C G T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCCAACAGGT
GCCATCTGTT
 T A C G G A T C G T A C C G T A G T C A A G T C C G T A T A C G A C T G A C G T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

SCRT1/MA0743.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCAACAGGT----
GAGCAACAGGTGGTT
 A C G T T A C G G A T C G T A C C G T A G T C A A G T C C G T A T A C G A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

SCRT2/MA0744.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCAACAGGT--
ATGCAACAGGTGG
 A C G T T A C G G A T C G T A C C G T A G T C A A G T C C G T A T A C G A C T G A C G T A C G T A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCCAACAGGT--
GAGGTCAAAAGGTCA
 A C G T A C G T A C G T T A C G G A T C G T A C C G T A G T C A A G T C C G T A T A C G A C T G A C G T A C G T A C G T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCAACAGGT--
GCCAGCTGBTNB
 T A C G G A T C G T A C C G T A G T C A A G T C C G T A T A C G A C T G A C G T A C G T A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCCAACAGGT
GGTGCCAAGT---
 A C G T A C G T A C G T T A C G G A T C G T A C C G T A G T C A A G T C C G T A T A C G A C T G A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCAACAGGT
GTAAACAG--
 T A C G G A T C G T A C C G T A G T C A A G T C C G T A T A C G A C T G A C G T
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCAACAGGT----
CNGACACCTGTTCNNN
 A C G T A C G T T A C G G A T C G T A C C G T A G T C A A G T C C G T A T A C G A C T G A C G T A C G T A C G T A C G T A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C