Information for 3-TMTATGCTGCCCCCTG (Motif 5)

A C G T T G C A G A C T G T C A C G A T A T C G A G T C A C G T C T A G A T G C G A T C T G A C A G T C A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A T A C G C T A G A C T G C A T G T A C G A G T C G T C A C T A G A T G C C G T A C A G T C T G A A C G T T G C A
p-value:1e-12
log p-value:-2.788e+01
Information Content per bp:1.662
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.29%
Number of Background Sequences with motif253.4
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets54.5 +/- 23.4bp
Average Position of motif in Background47.8 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:TMTATGCTGCCCCCTG---
-------CGCCCCCTGACA
 A C G T T G C A G A C T G T C A C G A T A T C G A G T C A C G T C T A G A T G C G A T C T G A C A G T C A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TMTATGCTGCCCCCTG-----
-CNNBRGCGCCCCCTGSTGGC
 A C G T T G C A G A C T G T C A C G A T A T C G A G T C A C G T C T A G A T G C G A T C T G A C A G T C A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TMTATGCTGCCCCCTG---
--NNANTTGACCCCTNNNN
 A C G T T G C A G A C T G T C A C G A T A T C G A G T C A C G T C T A G A T G C G A T C T G A C A G T C A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TMTATGCTGCCCCCTG
AATTTGCTGAC-----
 A C G T T G C A G A C T G T C A C G A T A T C G A G T C A C G T C T A G A T G C G A T C T G A C A G T C A G T C C G A T A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TMTATGCTGCCCCCTG---
--NNNNTTGACCCCTNNNN
 A C G T T G C A G A C T G T C A C G A T A T C G A G T C A C G T C T A G A T G C G A T C T G A C A G T C A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TMTATGCTGCCCCCTG-------
----TAGCGCCCCCTGGTGGCCA
 A C G T T G C A G A C T G T C A C G A T A T C G A G T C A C G T C T A G A T G C G A T C T G A C A G T C A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TMTATGCTGCCCCCTG-------
---ANAGTGCCACCTGGTGGCCA
 A C G T T G C A G A C T G T C A C G A T A T C G A G T C A C G T C T A G A T G C G A T C T G A C A G T C A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TMTATGCTGCCCCCTG
----TGCTGACTCA--
 A C G T T G C A G A C T G T C A C G A T A T C G A G T C A C G T C T A G A T G C G A T C T G A C A G T C A G T C C G A T A C T G
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TMTATGCTGCCCCCTG
-------TGACCYCT-
 A C G T T G C A G A C T G T C A C G A T A T C G A G T C A C G T C T A G A T G C G A T C T G A C A G T C A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TMTATGCTGCCCCCTG
------CTGACCTTTG
 A C G T T G C A G A C T G T C A C G A T A T C G A G T C A C G T C T A G A T G C G A T C T G A C A G T C A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G