Information for 9-ATGAGTGAAAGCA (Motif 13)

C G T A A C G T A C T G C G T A A C T G A C G T A C T G C G T A G T C A C G T A A C T G A T G C C G T A
Reverse Opposite:
A C G T A T C G A G T C A C G T A C G T A C G T A G T C G T C A A G T C A C G T G T A C C G T A A C G T
p-value:1e-9
log p-value:-2.176e+01
Information Content per bp:1.932
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.5 +/- 26.0bp
Average Position of motif in Background35.2 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ATGAGTGAAAGCA
-TGAGTGACAGSC
 C G T A A C G T A C T G C G T A A C T G A C G T A C T G C G T A G T C A C G T A A C T G A T G C C G T A
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATGAGTGAAAGCA
NTGATTGACAGN-
 C G T A A C G T A C T G C G T A A C T G A C G T A C T G C G T A G T C A C G T A A C T G A T G C C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATGAGTGAAAGCA
GAAAGTGAAAGT-
 C G T A A C G T A C T G C G T A A C T G A C G T A C T G C G T A G T C A C G T A A C T G A T G C C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATGAGTGAAAGCA
BTGABTGACAGS-
 C G T A A C G T A C T G C G T A A C T G A C G T A C T G C G T A G T C A C G T A A C T G A T G C C G T A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATGAGTGAAAGCA
---ACTGAAACCA
 C G T A A C G T A C T G C G T A A C T G A C G T A C T G C G T A G T C A C G T A A C T G A T G C C G T A
A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATGAGTGAAAGCA-
AGAAAGTGAAAGTGA
 A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C T G C G T A G T C A C G T A A C T G A T G C C G T A A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATGAGTGAAAGCA
AGGTGTGAAA---
 C G T A A C G T A C T G C G T A A C T G A C G T A C T G C G T A G T C A C G T A A C T G A T G C C G T A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATGAGTGAAAGCA
GAAATGACTCA-----
 A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C T G C G T A G T C A C G T A A C T G A T G C C G T A
C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATGAGTGAAAGCA
ACTATGAATGAATGAT
 A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C T G C G T A G T C A C G T A A C T G A T G C C G T A
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

FOS/MA0476.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGTGAAAGCA
NATGAGTCANN---
 A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C T G C G T A G T C A C G T A A C T G A T G C C G T A
T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A A C G T A C G T A C G T