Information for 5-AGDGTCACCTTGCYCT (Motif 6)

C G T A T A C G C A T G A T C G A G C T A G T C C G T A T A G C T A G C G A C T C G A T A C T G G A T C G A T C G T A C G C A T
Reverse Opposite:
C G T A C A T G C T A G C T A G G T A C C G T A C T G A A C T G A T C G A C G T A C T G C T G A T A G C G T A C A G T C C G A T
p-value:1e-13
log p-value:-3.148e+01
Information Content per bp:1.695
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif36.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets52.5 +/- 25.0bp
Average Position of motif in Background55.6 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AGDGTCACCTTGCYCT
-AGGTCACCCTGACCT
 C G T A T A C G C A T G A T C G A G C T A G T C C G T A T A G C T A G C G A C T C G A T A C T G G A T C G A T C G T A C G C A T
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AGDGTCACCTTGCYCT-
--GGTCANNGTGACCTN
 C G T A T A C G C A T G A T C G A G C T A G T C C G T A T A G C T A G C G A C T C G A T A C T G G A T C G A T C G T A C G C A T A C G T
A C G T A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGDGTCACCTTGCYCT-
AAGGTCACGGTGACCTG
 C G T A T A C G C A T G A T C G A G C T A G T C C G T A T A G C T A G C G A C T C G A T A C T G G A T C G A T C G T A C G C A T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGDGTCACCTTGCYCT--
AGTAGGTCACNGTGACCTAC
 A C G T A C G T C G T A T A C G C A T G A T C G A G C T A G T C C G T A T A G C T A G C G A C T C G A T A C T G G A T C G A T C G T A C G C A T A C G T A C G T
G C T A A T C G C A G T C T G A C T A G A C T G C A G T A T G C G T C A G A T C T A G C A C T G C A G T A T C G T G C A G A T C A T G C A G C T C G T A A T G C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGDGTCACCTTGCYCT
----TGACCTTGACCT
 C G T A T A C G C A T G A T C G A G C T A G T C C G T A T A G C T A G C G A C T C G A T A C T G G A T C G A T C G T A C G C A T
A C G T A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

FOSL1/MA0477.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGDGTCACCTTGCYCT
NATGAGTCACC-------
 A C G T A C G T C G T A T A C G C A T G A T C G A G C T A G T C C G T A T A G C T A G C G A C T C G A T A C T G G A T C G A T C G T A C G C A T
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGDGTCACCTTGCYCT
TGAGTCA---------
 C G T A T A C G C A T G A T C G A G C T A G T C C G T A T A G C T A G C G A C T C G A T A C T G G A T C G A T C G T A C G C A T
G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGDGTCACCTTGCYCT
ATGAGTCATCN------
 A C G T C G T A T A C G C A T G A T C G A G C T A G T C C G T A T A G C T A G C G A C T C G A T A C T G G A T C G A T C G T A C G C A T
T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGDGTCACCTTGCYCT
----TGACCTTGACCT
 C G T A T A C G C A T G A T C G A G C T A G T C C G T A T A G C T A G C G A C T C G A T A C T G G A T C G A T C G T A C G C A T
A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGDGTCACCTTGCYCT
CGCGCCGGGTCACGTA-----
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G C A T G A T C G A G C T A G T C C G T A T A G C T A G C G A C T C G A T A C T G G A T C G A T C G T A C G C A T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T A C G T A C G T