p-value: | 1e-9 |
log p-value: | -2.249e+01 |
Information Content per bp: | 1.938 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.73% |
Number of Background Sequences with motif | 2.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 40.6 +/- 25.0bp |
Average Position of motif in Background | 46.2 +/- 10.4bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTTGGCAGGAGG -CTTGGCAA---- |
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NFIA/MA0670.1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTTGGCAGGAGG NNTTGGCANN--- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTTGGCAGGAGG -NTTGGCANN--- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTTGGCAGGAGG --TTGGCA----- |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTTGGCAGGAGG --TTGACAGC--- |
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INSM1/MA0155.1/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCTTGGCAGGAGG-- ---TGTCAGGGGGCG |
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Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCTTGGCAGGAGG GGGGCTYGKCTGGGA- |
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MEIS3/MA0775.1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTTGGCAGGAGG --TTGACAGG--- |
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Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCTTGGCAGGAGG-- ---SDGCAGGTGCNS |
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Hic1/MA0739.1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTTGGCAGGAGG GGTTGGCAT---- |
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