Information for 4-GASSAAGGAMAGSAYY (Motif 6)

A C T G C G T A A T C G A T G C C G T A C T G A A C T G A C T G C G T A G T A C C G T A A C T G A T G C C G T A G A C T A G C T
Reverse Opposite:
T C G A C T G A A C G T A T C G A G T C A C G T C A T G A C G T A G T C A G T C A G C T A C G T A T C G A T G C A C G T A G T C
p-value:1e-11
log p-value:-2.674e+01
Information Content per bp:1.845
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 23.1bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GASSAAGGAMAGSAYY
---CAAGGHCANV---
 A C T G C G T A A T C G A T G C C G T A C T G A A C T G A C T G C G T A G T A C C G T A A C T G A T G C C G T A G A C T A G C T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GASSAAGGAMAGSAYY
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T C G A T G C C G T A C T G A A C T G A C T G C G T A G T A C C G T A A C T G A T G C C G T A G A C T A G C T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GASSAAGGAMAGSAYY
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A C T G C G T A A T C G A T G C C G T A C T G A A C T G A C T G C G T A G T A C C G T A A C T G A T G C C G T A G A C T A G C T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GASSAAGGAMAGSAYY
AAGTTCAAGGTCAGC---
 A C G T A C G T A C T G C G T A A T C G A T G C C G T A C T G A A C T G A C T G C G T A G T A C C G T A A C T G A T G C C G T A G A C T A G C T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GASSAAGGAMAGSAYY
-AGAAACGAAAGT---
 A C T G C G T A A T C G A T G C C G T A C T G A A C T G A C T G C G T A G T A C C G T A A C T G A T G C C G T A G A C T A G C T
A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GASSAAGGAMAGSAYY
-BTCAAGGTCA-----
 A C T G C G T A A T C G A T G C C G T A C T G A A C T G A C T G C G T A G T A C C G T A A C T G A T G C C G T A G A C T A G C T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GASSAAGGAMAGSAYY
--CAAAGGTCAG----
 A C T G C G T A A T C G A T G C C G T A C T G A A C T G A C T G C G T A G T A C C G T A A C T G A T G C C G T A G A C T A G C T
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GASSAAGGAMAGSAYY
--CCAGGAACAG----
 A C T G C G T A A T C G A T G C C G T A C T G A A C T G A C T G C G T A G T A C C G T A A C T G A T G C C G T A G A C T A G C T
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GASSAAGGAMAGSAYY
--TCAAGGTCAN----
 A C T G C G T A A T C G A T G C C G T A C T G A A C T G A C T G C G T A G T A C C G T A A C T G A T G C C G T A G A C T A G C T
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GASSAAGGAMAGSAYY
AAACAGACAAAGGAAT-----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T C G A T G C C G T A C T G A A C T G A C T G C G T A G T A C C G T A A C T G A T G C C G T A G A C T A G C T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T