Information for 2-TCATGTTTMA (Motif 20)

A G C T A G T C C G T A C G A T C T A G C G A T C A G T A C G T G T C A C G T A
Reverse Opposite:
A C G T A C G T G T C A G T C A G C T A A G T C C G T A C G A T C T A G T C G A
p-value:1e-8
log p-value:-1.936e+01
Information Content per bp:1.763
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.72%
Number of Background Sequences with motif407.6
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets55.3 +/- 25.1bp
Average Position of motif in Background48.2 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCATGTTTMA--
TTAATGTTTAACC
 A C G T A G C T A G T C C G T A C G A T C T A G C G A T C A G T A C G T G T C A C G T A A C G T A C G T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TCATGTTTMA---
TATCATAATTAAGGA
 A C G T A C G T A G C T A G T C C G T A C G A T C T A G C G A T C A G T A C G T G T C A C G T A A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TCATGTTTMA
---TGAGTCA
 A G C T A G T C C G T A C G A T C T A G C G A T C A G T A C G T G T C A C G T A
A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A

FOS/MA0476.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCATGTTTMA--
-NATGAGTCANN
 A G C T A G T C C G T A C G A T C T A G C G A T C A G T A C G T G T C A C G T A A C G T A C G T
A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCATGTTTMA
GKVTCADRTTWC-
 A C G T A C G T A C G T A G C T A G T C C G T A C G A T C T A G C G A T C A G T A C G T G T C A C G T A
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

JUND/MA0491.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCATGTTTMA--
-NATGAGTCACN
 A G C T A G T C C G T A C G A T C T A G C G A T C A G T A C G T G T C A C G T A A C G T A C G T
A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCATGTTTMA--
NNATGASTCATH
 A G C T A G T C C G T A C G A T C T A G C G A T C A G T A C G T G T C A C G T A A C G T A C G T
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCATGTTTMA
NVWTGTTTAC
 A G C T A G T C C G T A C G A T C T A G C G A T C A G T A C G T G T C A C G T A
A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCATGTTTMA--
--ATGASTCATY
 A G C T A G T C C G T A C G A T C T A G C G A T C A G T A C G T G T C A C G T A A C G T A C G T
A C G T A C G T T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCATGTTTMA---
---TGATTGATGA
 A G C T A G T C C G T A C G A T C T A G C G A T C A G T A C G T G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A