Information for 1-CTTGGTTGGCYAGAAT (Motif 2)

A G T C A C G T C G A T A C T G C A T G A G C T A C G T A C T G T A C G A T G C A G T C C G T A A C T G C G T A C T G A A C G T
Reverse Opposite:
G T C A G A C T C G A T G T A C C G A T T C A G T A C G A G T C T G A C G T C A C T G A G A T C G T A C C G T A T C G A C T A G
p-value:1e-14
log p-value:-3.370e+01
Information Content per bp:1.671
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.1 +/- 22.9bp
Average Position of motif in Background59.4 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTTGGTTGGCYAGAAT
--TGATTGGCTANN--
 A G T C A C G T C G A T A C T G C A T G A G C T A C G T A C T G T A C G A T G C A G T C C G T A A C T G C G T A C T G A A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTTGGTTGGCYAGAAT
NNNNGTTGATTGGGTCG---
 A C G T A C G T A C G T A C G T A G T C A C G T C G A T A C T G C A T G A G C T A C G T A C T G T A C G A T G C A G T C C G T A A C T G C G T A C T G A A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTTGGTTGGCYAGAAT
-TTGATTGN-------
 A G T C A C G T C G A T A C T G C A T G A G C T A C G T A C T G T A C G A T G C A G T C C G T A A C T G C G T A C T G A A C G T
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:4
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CTTGGTTGGCYAGAAT
----ATTTCCAAGAA-
 A G T C A C G T C G A T A C T G C A T G A G C T A C G T A C T G T A C G A T G C A G T C C G T A A C T G C G T A C T G A A C G T
A C G T A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CTTGGTTGGCYAGAAT
------TGCCCAGNHW
 A G T C A C G T C G A T A C T G C A T G A G C T A C G T A C T G T A C G A T G C A G T C C G T A A C T G C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CTTGGTTGGCYAGAAT
CGTGGGTGGTCC----
 A G T C A C G T C G A T A C T G C A T G A G C T A C G T A C T G T A C G A T G C A G T C C G T A A C T G C G T A C T G A A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTTGGTTGGCYAGAAT
-CTGATTGGTCNATTT
 A G T C A C G T C G A T A C T G C A T G A G C T A C G T A C T G T A C G A T G C A G T C C G T A A C T G C G T A C T G A A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGGTTGGCYAGAAT
TNNTCCTTTGTTCTNNT----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G A T A C T G C A T G A G C T A C G T A C T G T A C G A T G C A G T C C G T A A C T G C G T A C T G A A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CTTGGTTGGCYAGAAT
YCTTTGTTCC-------
 A C G T A G T C A C G T C G A T A C T G C A T G A G C T A C G T A C T G T A C G A T G C A G T C C G T A A C T G C G T A C T G A A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:10
Score:0.48
Offset:-6
Orientation:reverse strand
Alignment:------CTTGGTTGGCYAGAAT
GTCACGCTTGGCTGCNCNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G A T A C T G C A T G A G C T A C G T A C T G T A C G A T G C A G T C C G T A A C T G C G T A C T G A A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C A C G T A C G T A C G T