Information for 8-AGAACASAGGSATMTG (Motif 14)

C G T A A T C G C G T A C G T A G A T C C G T A T A G C C G T A A C T G C T A G A T C G G T C A G A C T T G A C C G A T C T A G
Reverse Opposite:
A G T C C G T A A C T G C G T A A C G T A T G C A G T C G T A C A C G T A T C G C G A T C T A G A C G T A C G T A T G C A C G T
p-value:1e-9
log p-value:-2.127e+01
Information Content per bp:1.757
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.0 +/- 13.2bp
Average Position of motif in Background38.4 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGAACASAGGSATMTG
ATAAGAACAAAGGACTA--
 A C G T A C G T A C G T C G T A A T C G C G T A C G T A G A T C C G T A T A G C C G T A A C T G C T A G A T C G G T C A G A C T T G A C C G A T C T A G
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGAACASAGGSATMTG
AGAAGAACAAAGGACTA--
 A C G T A C G T A C G T C G T A A T C G C G T A C G T A G A T C C G T A T A G C C G T A A C T G C T A G A T C G G T C A G A C T T G A C C G A T C T A G
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGAACASAGGSATMTG
GGAACAAAGR------
 C G T A A T C G C G T A C G T A G A T C C G T A T A G C C G T A A C T G C T A G A T C G G T C A G A C T T G A C C G A T C T A G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGAACASAGGSATMTG
AAAACAAAGG------
 C G T A A T C G C G T A C G T A G A T C C G T A T A G C C G T A A C T G C T A G A T C G G T C A G A C T T G A C C G A T C T A G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGAACASAGGSATMTG
AAAGATCAAAGGGTT---
 A C G T A C G T C G T A A T C G C G T A C G T A G A T C C G T A T A G C C G T A A C T G C T A G A T C G G T C A G A C T T G A C C G A T C T A G
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGAACASAGGSATMTG
ACATCAAAGGNA----
 C G T A A T C G C G T A C G T A G A T C C G T A T A G C C G T A A C T G C T A G A T C G G T C A G A C T T G A C C G A T C T A G
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGAACASAGGSATMTG
NANAGATCAAAGGGNNN--
 A C G T A C G T A C G T C G T A A T C G C G T A C G T A G A T C C G T A T A G C C G T A A C T G C T A G A T C G G T C A G A C T T G A C C G A T C T A G
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGAACASAGGSATMTG
AAAGATCAAAGG------
 A C G T A C G T C G T A A T C G C G T A C G T A G A T C C G T A T A G C C G T A A C T G C T A G A T C G G T C A G A C T T G A C C G A T C T A G
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGAACASAGGSATMTG
-GAACAATGGN-----
 C G T A A T C G C G T A C G T A G A T C C G T A T A G C C G T A A C T G C T A G A T C G G T C A G A C T T G A C C G A T C T A G
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGAACASAGGSATMTG
AAAAATAACAAACGG-----
 A C G T A C G T A C G T A C G T C G T A A T C G C G T A C G T A G A T C C G T A T A G C C G T A A C T G C T A G A T C G G T C A G A C T T G A C C G A T C T A G
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T A C G T A C G T A C G T A C G T