Information for 8-AGGGCTGATC (Motif 29)

C G T A C A T G A C T G A C T G A G T C A C G T A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C C G T A A C T G A G T C A G T C G T A C A C G T
p-value:1e-6
log p-value:-1.585e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.0 +/- 31.0bp
Average Position of motif in Background53.9 +/- 37.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGGGCTGATC
AATTTGCTGAC-
 A C G T A C G T C G T A C A T G A C T G A C T G A G T C A C G T A C T G C G T A A C G T A G T C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGGGCTGATC
--NGCTN---
 C G T A C A T G A C T G A C T G A G T C A C G T A C T G C G T A A C G T A G T C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGGCTGATC
NNNANTGA--
 C G T A C A T G A C T G A C T G A G T C A C G T A C T G C G T A A C G T A G T C
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGGGCTGATC-
---GCTAATCC
 C G T A C A T G A C T G A C T G A G T C A C G T A C T G C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGGGCTGATC--
----ATAATCCC
 C G T A C A T G A C T G A C T G A G T C A C G T A C T G C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGGGCTGATC--
AAAWWTGCTGACWWD
 A C G T A C G T A C G T C G T A C A T G A C T G A C T G A G T C A C G T A C T G C G T A A C G T A G T C A C G T A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

SREBF2/MA0596.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGGCTGATC
ATGGGGTGAT-
 A C G T C G T A C A T G A C T G A C T G A G T C A C G T A C T G C G T A A C G T A G T C
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGGGCTGATC---
---YCTTATCWVN
 C G T A C A T G A C T G A C T G A G T C A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGGGCTGATC--
--NCCTTATCTG
 C G T A C A T G A C T G A C T G A G T C A C G T A C T G C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGGGCTGATC---
---YCTTATCTBN
 C G T A C A T G A C T G A C T G A G T C A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C