p-value: | 1e-8 |
log p-value: | -2.018e+01 |
Information Content per bp: | 1.829 |
Number of Target Sequences with motif | 19.0 |
Percentage of Target Sequences with motif | 3.08% |
Number of Background Sequences with motif | 262.5 |
Percentage of Background Sequences with motif | 0.53% |
Average Position of motif in Targets | 42.4 +/- 25.3bp |
Average Position of motif in Background | 51.1 +/- 29.3bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTGTGTCTGA VBSYGTCTGG |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.69 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTGTGTCTGA --CTGTCTGG |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 3 |
Score: | 0.69 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTGTGTCTGA --TWGTCTGV |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 4 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTGTGTCTGA----- NNTNNTGTCTGGNNTNG |
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KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GTGTGTCTGA GGGGGTGTGTCC-- |
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PB0151.1_Myf6_2/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTGTGTCTGA---- GGNGCGNCTGTTNNN |
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PB0130.1_Gm397_2/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTGTGTCTGA---- NNGCGTGTGTGCNGCN |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTGTGTCTGA----- ---TGTCTGDCACCT |
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PB0166.1_Sox12_2/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GTGTGTCTGA-- ANTCCTTTGTCTNNNN |
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EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GTGTGTCTGA NTGGGTGTGGCC-- |
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