Information for 8-GTCTCTAGATTGTCCT (Motif 11)

A C T G A G C T A G T C A C G T G T A C A C G T C G T A A C T G G C T A C A G T A C G T A C T G A C G T G T A C A G T C G A C T
Reverse Opposite:
C G T A C T A G A C T G C G T A T G A C C G T A G T C A C A G T A G T C C G A T C G T A A C T G C G T A C T A G C T G A A G T C
p-value:1e-10
log p-value:-2.477e+01
Information Content per bp:1.726
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif22.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.8 +/- 15.4bp
Average Position of motif in Background51.5 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.54
Offset:9
Orientation:forward strand
Alignment:GTCTCTAGATTGTCCT
---------TTTTCCA
 A C T G A G C T A G T C A C G T G T A C A C G T C G T A A C T G G C T A C A G T A C G T A C T G A C G T G T A C A G T C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTCTCTAGATTGTCCT---
---AANTTATTGTTCTNNA
 A C T G A G C T A G T C A C G T G T A C A C G T C G T A A C T G G C T A C A G T A C G T A C T G A C G T G T A C A G T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTCTCTAGATTGTCCT---
---NNTTTATTGTTCTNNN
 A C T G A G C T A G T C A C G T G T A C A C G T C G T A A C T G G C T A C A G T A C G T A C T G A C G T G T A C A G T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0074.1_Sox8_1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTCTCTAGATTGTCCT---
--GTATCTATTGTTCTTTA
 A C T G A G C T A G T C A C G T G T A C A C G T C G T A A C T G G C T A C A G T A C G T A C T G A C G T G T A C A G T C G A C T A C G T A C G T A C G T
A C G T A C G T C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GTCTCTAGATTGTCCT
-----CTCATTGTC--
 A C T G A G C T A G T C A C G T G T A C A C G T C G T A A C T G G C T A C A G T A C G T A C T G A C G T G T A C A G T C G A C T
A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTCTCTAGATTGTCCT
-NTTATTGATTTTTT-
 A C T G A G C T A G T C A C G T G T A C A C G T C G T A A C T G G C T A C A G T A C G T A C T G A C G T G T A C A G T C G A C T
A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GTCTCTAGATTGTCCT--
--------ATTTTCCATT
 A C T G A G C T A G T C A C G T G T A C A C G T C G T A A C T G G C T A C A G T A C G T A C T G A C G T G T A C A G T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:GTCTCTAGATTGTCCT--
----------TGACCTYA
 A C T G A G C T A G T C A C G T G T A C A C G T C G T A A C T G G C T A C A G T A C G T A C T G A C G T G T A C A G T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GTCTCTAGATTGTCCT--
--------ATTTTCCATT
 A C T G A G C T A G T C A C G T G T A C A C G T C G T A A C T G G C T A C A G T A C G T A C T G A C G T G T A C A G T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.50
Offset:8
Orientation:forward strand
Alignment:GTCTCTAGATTGTCCT--
--------ATTTTCCATT
 A C T G A G C T A G T C A C G T G T A C A C G T C G T A A C T G G C T A C A G T A C G T A C T G A C G T G T A C A G T C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T