Information for 1-CATTTAKGAATATCTT (Motif 1)

G T A C G C T A G A C T C G A T A C G T C G T A C A T G C T A G C T G A G C T A A C G T C G T A C G A T G T A C A G C T A C G T
Reverse Opposite:
C G T A C T G A A C T G C G T A G A C T C G T A C A G T A G C T A G T C G T A C A C G T C G T A C G T A C T G A C G A T A C T G
p-value:1e-14
log p-value:-3.294e+01
Information Content per bp:1.755
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 24.1bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CATTTAKGAATATCTT
TNNATTATGCATANNTT
 A C G T G T A C G C T A G A C T C G A T A C G T C G T A C A T G C T A G C T G A G C T A A C G T C G T A C G A T G T A C A G C T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CATTTAKGAATATCTT----
-----AGAAATGACTTCCCT
 G T A C G C T A G A C T C G A T A C G T C G T A C A T G C T A G C T G A G C T A A C G T C G T A C G A T G T A C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

PH0066.1_Hoxc11/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CATTTAKGAATATCTT
NNNTTTTACGACNTTN--
 A C G T A C G T G T A C G C T A G A C T C G A T A C G T C G T A C A T G C T A G C T G A G C T A A C G T C G T A C G A T G T A C A G C T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CATTTAKGAATATCTT
DGWTTTATGRCN-----
 A C G T G T A C G C T A G A C T C G A T A C G T C G T A C A T G C T A G C T G A G C T A A C G T C G T A C G A T G T A C A G C T A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CATTTAKGAATATCTT
TCTTTANTAATANN--
 G T A C G C T A G A C T C G A T A C G T C G T A C A T G C T A G C T G A G C T A A C G T C G T A C G A T G T A C A G C T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CATTTAKGAATATCTT-
TNATTATTAATTAATTA
 G T A C G C T A G A C T C G A T A C G T C G T A C A T G C T A G C T G A G C T A A C G T C G T A C G A T G T A C A G C T A C G T A C G T
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A

PH0047.1_Hoxa11/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CATTTAKGAATATCTT
NNGTTTTACGACTTTA--
 A C G T A C G T G T A C G C T A G A C T C G A T A C G T C G T A C A T G C T A G C T G A G C T A A C G T C G T A C G A T G T A C A G C T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CATTTAKGAATATCTT
ANNTTTTACGACNTNN--
 A C G T A C G T G T A C G C T A G A C T C G A T A C G T C G T A C A T G C T A G C T G A G C T A A C G T C G T A C G A T G T A C A G C T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CATTTAKGAATATCTT
NTTTTACGAC------
 G T A C G C T A G A C T C G A T A C G T C G T A C A T G C T A G C T G A G C T A A C G T C G T A C G A T G T A C A G C T A C G T
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0172.1_Tlx2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CATTTAKGAATATCTT-
AANTTATTAATTAATTA
 G T A C G C T A G A C T C G A T A C G T C G T A C A T G C T A G C T G A G C T A A C G T C G T A C G A T G T A C A G C T A C G T A C G T
G C A T C G T A C T A G G A C T G C A T C G T A C G A T G A C T C G T A C G T A G C A T C G A T C T G A G C T A G A C T C G A T T G C A