Information for 19-CACAAGGATGACT (Motif 35)

A G T C C G T A A G T C C G T A C G T A A C T G C T A G C G T A A C G T A T C G C T G A A T G C A C G T
Reverse Opposite:
C G T A A T C G A G C T A T G C C G T A C G A T A G T C A G T C A C G T G C A T T C A G C G A T C T A G
p-value:1e-7
log p-value:-1.678e+01
Information Content per bp:1.757
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 31.1bp
Average Position of motif in Background53.6 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACAAGGATGACT--
CTACTAGGATGTNNTN
 A C G T A G T C C G T A A G T C C G T A C G T A A C T G C T A G C G T A A C G T A T C G C T G A A T G C A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

FOSL2/MA0478.1/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CACAAGGATGACT---
-----GGATGACTCAT
 A G T C C G T A A G T C C G T A C G T A A C T G C T A G C G T A A C G T A T C G C T G A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACAAGGATGACT--
GTCATGCHTGRCTGS
 A G T C C G T A A G T C C G T A C G T A A C T G C T A G C G T A A C G T A T C G C T G A A T G C A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

BATF::JUN/MA0462.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CACAAGGATGACT--
----GAAATGACTCA
 A G T C C G T A A G T C C G T A C G T A A C T G C T A G C G T A A C G T A T C G C T G A A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CACAAGGATGACT----
-----GGATGACTCATC
 A G T C C G T A A G T C C G T A C G T A A C T G C T A G C G T A A C G T A T C G C T G A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C

JUNB/MA0490.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CACAAGGATGACT---
-----GGATGACTCAT
 A G T C C G T A A G T C C G T A C G T A A C T G C T A G C G T A A C G T A T C G C T G A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

Pax6/MA0069.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CACAAGGATGACT-
TTCACGCATGAGTT
 A G T C C G T A A G T C C G T A C G T A A C T G C T A G C G T A A C G T A T C G C T G A A T G C A C G T A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CACAAGGATGACT---
--AGGAGATGACTCAT
 A G T C C G T A A G T C C G T A C G T A A C T G C T A G C G T A A C G T A T C G C T G A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CACAAGGATGACT---
------RATGASTCAT
 A G T C C G T A A G T C C G T A C G T A A C T G C T A G C G T A A C G T A T C G C T G A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T

FOS/MA0476.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CACAAGGATGACT----
------NATGAGTCANN
 A G T C C G T A A G T C C G T A C G T A A C T G C T A G C G T A A C G T A T C G C T G A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A