Information for 22-GGGAMRMTGAGYYTCT (Motif 29)

C T A G A C T G A C T G C G T A G T C A C T A G G T C A A C G T A C T G C G T A A C T G A G C T G A C T A C G T A G T C A C G T
Reverse Opposite:
G T C A T C A G C G T A C T G A C T G A A G T C A C G T A G T C C G T A A C G T A G T C A C G T A C G T A G T C A G T C A G T C
p-value:1e-8
log p-value:-1.989e+01
Information Content per bp:1.855
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.8 +/- 14.8bp
Average Position of motif in Background39.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGGAMRMTGAGYYTCT
-GWAAYHTGABMC---
 C T A G A C T G A C T G C G T A G T C A C T A G G T C A A C G T A C T G C G T A A C T G A G C T G A C T A C G T A G T C A C G T
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GGGAMRMTGAGYYTCT--
-NTNNNAGGAGTCTCNTN
 C T A G A C T G A C T G C G T A G T C A C T A G G T C A A C G T A C T G C G T A A C T G A G C T G A C T A C G T A G T C A C G T A C G T A C G T
A C G T A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGGAMRMTGAGYYTCT
GGGAATTGTAGT----
 C T A G A C T G A C T G C G T A G T C A C T A G G T C A A C G T A C T G C G T A A C T G A G C T G A C T A C G T A G T C A C G T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GGGAMRMTGAGYYTCT
TGGGGA------------
 A C G T A C G T C T A G A C T G A C T G C G T A G T C A C T A G G T C A A C G T A C T G C G T A A C T G A G C T G A C T A C G T A G T C A C G T
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GGGAMRMTGAGYYTCT
-GWAAYHTGAKMC---
 C T A G A C T G A C T G C G T A G T C A C T A G G T C A A C G T A C T G C G T A A C T G A G C T G A C T A C G T A G T C A C G T
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:6
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GGGAMRMTGAGYYTCT
--NNNANTGA------
 C T A G A C T G A C T G C G T A G T C A C T A G G T C A A C G T A C T G C G T A A C T G A G C T G A C T A C G T A G T C A C G T
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:GGGAMRMTGAGYYTCT
-----NATGAGTCACC
 C T A G A C T G A C T G C G T A G T C A C T A G G T C A A C G T A C T G C G T A A C T G A G C T G A C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.48
Offset:-6
Orientation:reverse strand
Alignment:------GGGAMRMTGAGYYTCT
NNNNGGGGGAAGANGG------
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A G T C A C T A G G T C A A C G T A C T G C G T A A C T G A G C T G A C T A C G T A G T C A C G T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:9
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GGGAMRMTGAGYYTCT
NAGGTCANTGACCT---
 A C G T C T A G A C T G A C T G C G T A G T C A C T A G G T C A A C G T A C T G C G T A A C T G A G C T G A C T A C G T A G T C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GGGAMRMTGAGYYTCT
CSTGGGAAAD---------
 A C G T A C G T A C G T C T A G A C T G A C T G C G T A G T C A C T A G G T C A A C G T A C T G C G T A A C T G A G C T G A C T A C G T A G T C A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T