Information for 20-RWGCWKTKTGCTSKWA (Motif 27)

C T G A C G A T A C T G A G T C C G T A A C T G A C G T C A T G A C G T A C T G A G T C A C G T A T C G A C T G C G T A C G T A
Reverse Opposite:
A C G T C G A T G T A C T A C G C G T A A C T G A G T C C G T A G T A C C G T A G T A C C G A T A C T G A G T C C G T A A G C T
p-value:1e-8
log p-value:-1.989e+01
Information Content per bp:1.808
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.2 +/- 18.0bp
Average Position of motif in Background71.8 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.55
Offset:4
Orientation:forward strand
Alignment:RWGCWKTKTGCTSKWA-----
----AGGACGCTGTAAAGGGA
 C T G A C G A T A C T G A G T C C G T A A C T G A C G T C A T G A C G T A C T G A G T C A C G T A T C G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:RWGCWKTKTGCTSKWA-----
----AAGACGCTGTAAAGCGA
 C T G A C G A T A C T G A G T C C G T A A C T G A C G T C A T G A C G T A C T G A G T C A C G T A T C G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:RWGCWKTKTGCTSKWA-----
----AAGACGCTGTAAAGCGA
 C T G A C G A T A C T G A G T C C G T A A C T G A C G T C A T G A C G T A C T G A G T C A C G T A T C G A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-RWGCWKTKTGCTSKWA
NNNNTTGTGTGCTTNN-
 A C G T C T G A C G A T A C T G A G T C C G T A A C T G A C G T C A T G A C G T A C T G A G T C A C G T A T C G A C T G C G T A C G T A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:RWGCWKTKTGCTSKWA
---CTTTGT-------
 C T G A C G A T A C T G A G T C C G T A A C T G A C G T C A T G A C G T A C T G A G T C A C G T A T C G A C T G C G T A C G T A
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:RWGCWKTKTGCTSKWA
--------NGCTN---
 C T G A C G A T A C T G A G T C C G T A A C T G A C G T C A T G A C G T A C T G A G T C A C G T A T C G A C T G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----RWGCWKTKTGCTSKWA
NNNANTGCAGTGCNNTT---
 A C G T A C G T A C G T A C G T C T G A C G A T A C T G A G T C C G T A A C T G A C G T C A T G A C G T A C T G A G T C A C G T A T C G A C T G C G T A C G T A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T A C G T

POL001.1_MTE/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--RWGCWKTKTGCTSKWA-
NCGACCGCTCCGCTCGAAA
 A C G T A C G T C T G A C G A T A C T G A G T C C G T A A C T G A C G T C A T G A C G T A C T G A G T C A C G T A T C G A C T G C G T A C G T A A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:RWGCWKTKTGCTSKWA
--CCWTTGTYYB----
 C T G A C G A T A C T G A G T C C G T A A C T G A C G T C A T G A C G T A C T G A G T C A C G T A T C G A C T G C G T A C G T A
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:RWGCWKTKTGCTSKWA
---CAGTGTGGTCGC-
 C T G A C G A T A C T G A G T C C G T A A C T G A C G T C A T G A C G T A C T G A G T C A C G T A T C G A C T G C G T A C G T A
A C G T A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T