Information for 11-KCAKSGCCASATT (Motif 20)

A C T G A G T C C G T A A C T G T A C G A C T G A G T C A G T C C G T A A T G C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A T C G A C G T A C T G A C T G A G T C A T C G G T A C A C G T A C T G G T A C
p-value:1e-9
log p-value:-2.222e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.6 +/- 19.2bp
Average Position of motif in Background19.0 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:KCAKSGCCASATT
-CAAGGHCANV--
 A C T G A G T C C G T A A C T G T A C G A C T G A G T C A G T C C G T A A T G C C G T A A C G T A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-KCAKSGCCASATT
NTCAAGGTCA----
 A C G T A C T G A G T C C G T A A C T G T A C G A C T G A G T C A G T C C G T A A T G C C G T A A C G T A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-KCAKSGCCASATT
BTCAAGGTCA----
 A C G T A C T G A G T C C G T A A C T G T A C G A C T G A G T C A G T C C G T A A T G C C G T A A C G T A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:KCAKSGCCASATT-
--GCNGCCATCTTG
 A C T G A G T C C G T A A C T G T A C G A C T G A G T C A G T C C G T A A T G C C G T A A C G T A C G T A C G T
A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----KCAKSGCCASATT
AAGTTCAAGGTCAGC--
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G T A C G A C T G A G T C A G T C C G T A A T G C C G T A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:KCAKSGCCASATT
--CGTGCCAAG--
 A C T G A G T C C G T A A C T G T A C G A C T G A G T C A G T C C G T A A T G C C G T A A C G T A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:KCAKSGCCASATT
----TGCCAA---
 A C T G A G T C C G T A A C T G T A C G A C T G A G T C A G T C C G T A A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---KCAKSGCCASATT-
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C T G A G T C C G T A A C T G T A C G A C T G A G T C A G T C C G T A A T G C C G T A A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:KCAKSGCCASATT------
--AAGGCCAGATGGTCCGG
 A C T G A G T C C G T A A C T G T A C G A C T G A G T C A G T C C G T A A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:KCAKSGCCASATT
---ATGCCAGACN
 A C T G A G T C C G T A A C T G T A C G A C T G A G T C A G T C C G T A A T G C C G T A A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C