Information for 12-GCCACCAGCAAGTYAC (Motif 17)

A C T G A G T C G A T C G C T A A T G C A G T C C G T A A C T G A T G C C G T A C T G A A C T G C A G T A G C T C T G A A G T C
Reverse Opposite:
T C A G A G C T T C A G G C T A T A G C G A C T C G A T A T C G T A G C A C G T A C T G A T C G C A G T C T A G C T A G T A G C
p-value:1e-10
log p-value:-2.346e+01
Information Content per bp:1.691
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif40.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets56.1 +/- 26.6bp
Average Position of motif in Background57.9 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCACCAGCAAGTYAC
CCACACAGCAGGAGA-
 A C T G A G T C G A T C G C T A A T G C A G T C C G T A A C T G A T G C C G T A C T G A A C T G C A G T A G C T C T G A A G T C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCACCAGCAAGTYAC
--DCTCAGCAGG----
 A C T G A G T C G A T C G C T A A T G C A G T C C G T A A C T G A T G C C G T A C T G A A C T G C A G T A G C T C T G A A G T C
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCACCAGCAAGTYAC
CCACACAGCAGGAGA-
 A C T G A G T C G A T C G C T A A T G C A G T C C G T A A C T G A T G C C G T A C T G A A C T G C A G T A G C T C T G A A G T C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCCACCAGCAAGTYAC
---ANCAGGAAGT---
 A C T G A G T C G A T C G C T A A T G C A G T C C G T A A C T G A T G C C G T A C T G A A C T G C A G T A G C T C T G A A G T C
A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCCACCAGCAAGTYAC
---ACVAGGAAGT---
 A C T G A G T C G A T C G C T A A T G C A G T C C G T A A C T G A T G C C G T A C T G A A C T G C A G T A G C T C T G A A G T C
A C G T A C G T A C G T G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCCACCAGCAAGTYAC
---CACAGCAGGGGG-
 A C T G A G T C G A T C G C T A A T G C A G T C C G T A A C T G A T G C C G T A C T G A A C T G C A G T A G C T C T G A A G T C
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCCACCAGCAAGTYAC
---ANCAGGATGT---
 A C T G A G T C G A T C G C T A A T G C A G T C C G T A A C T G A T G C C G T A C T G A A C T G C A G T A G C T C T G A A G T C
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCCACCAGCAAGTYAC
GCGACCACCGAA----
 A C T G A G T C G A T C G C T A A T G C A G T C C G T A A C T G A T G C C G T A C T G A A C T G C A G T A G C T C T G A A G T C
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCCACCAGCAAGTYAC
GAGCACAGCAGGACA-
 A C T G A G T C G A T C G C T A A T G C A G T C C G T A A C T G A T G C C G T A C T G A A C T G C A G T A G C T C T G A A G T C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T

GCM1/MA0646.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCCACCAGCAAGTYAC
-GTACCCGCATN----
 A C T G A G T C G A T C G C T A A T G C A G T C C G T A A C T G A T G C C G T A C T G A A C T G C A G T A G C T C T G A A G T C
A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T A C G T A C G T