Information for 5-RAAATYAGCGTMG (Motif 7)

C T G A C G T A C G T A C G T A A G C T A G C T C G T A A C T G G T A C A C T G A C G T G T A C C T A G
Reverse Opposite:
A G T C A C T G C G T A A G T C A C T G A G T C G A C T C T G A C T G A A C G T A C G T A C G T A G C T
p-value:1e-11
log p-value:-2.623e+01
Information Content per bp:1.809
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.4 +/- 21.4bp
Average Position of motif in Background25.0 +/- 1.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:RAAATYAGCGTMG
--AATTAGTG---
 C T G A C G T A C G T A C G T A A G C T A G C T C G T A A C T G G T A C A C T G A C G T G T A C C T A G
A C G T A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:RAAATYAGCGTMG-
-AAATTAGCATAAT
 C T G A C G T A C G T A C G T A A G C T A G C T C G T A A C T G G T A C A C T G A C G T G T A C C T A G A C G T
A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----RAAATYAGCGTMG
AAGGCGAAATCATCGCA-
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A C G T A A G C T A G C T C G T A A C T G G T A C A C T G A C G T G T A C C T A G
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:RAAATYAGCGTMG
CAAATCACTG---
 C T G A C G T A C G T A C G T A A G C T A G C T C G T A A C T G G T A C A C T G A C G T G T A C C T A G
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--RAAATYAGCGTMG---
CAAAAAGGGGCGTGGCAT
 A C G T A C G T C T G A C G T A C G T A C G T A A G C T A G C T C G T A A C T G G T A C A C T G A C G T G T A C C T A G A C G T A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:RAAATYAGCGTMG
-AAATCACAGCA-
 C T G A C G T A C G T A C G T A A G C T A G C T C G T A A C T G G T A C A C T G A C G T G T A C C T A G
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:RAAATYAGCGTMG
-TAATTTGCATAA
 C T G A C G T A C G T A C G T A A G C T A G C T C G T A A C T G G T A C A C T G A C G T G T A C C T A G
A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:RAAATYAGCGTMG
---ATTTGCATA-
 C T G A C G T A C G T A C G T A A G C T A G C T C G T A A C T G G T A C A C T G A C G T G T A C C T A G
A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RAAATYAGCGTMG
-TAATTTGCATAA
 C T G A C G T A C G T A C G T A A G C T A G C T C G T A A C T G G T A C A C T G A C G T G T A C C T A G
A C G T C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:RAAATYAGCGTMG-
--AATTTGCATANT
 C T G A C G T A C G T A C G T A A G C T A G C T C G T A A C T G G T A C A C T G A C G T G T A C C T A G A C G T
A C G T A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T