Information for 2-AGCATCACYRGGSATG (Motif 4)

C T G A A C T G A G T C C G T A G C A T A G T C C G T A T G A C A G T C C T G A C T A G A C T G A T C G C G T A C A G T A C T G
Reverse Opposite:
A G T C G T C A C G A T A T G C G T A C A G T C A G C T C T A G A C T G A C G T C T A G C G T A C G A T A C T G T G A C A G C T
p-value:1e-12
log p-value:-2.817e+01
Information Content per bp:1.709
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.7 +/- 14.1bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TP53/MA0106.3/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGCATCACYRGGSATG--
GACATGCCCGGGCATGTT
 C T G A A C T G A G T C C G T A G C A T A G T C C G T A T G A C A G T C C T G A C T A G A C T G A T C G C G T A C A G T A C T G A C G T A C G T
C T A G C T G A G A T C C G T A C G A T T A C G G A T C G A T C G A T C T C A G C T A G C T A G A G T C C G T A G C A T C T A G G A C T G A C T

p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGCATCACYRGGSATG--
NRRRCAWGTCCDGRCATGYY
 A C G T A C G T C T G A A C T G A G T C C G T A G C A T A G T C C G T A T G A C A G T C C T G A C T A G A C T G A T C G C G T A C A G T A C T G A C G T A C G T
C G T A C T G A C T A G C T G A A G T C G C T A C G A T A T C G G A C T G A T C A G T C C T G A C T A G C T A G A G T C G C T A C G A T C T A G G A T C G A T C

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGCATCACYRGGSATG--
NNNGCATGTCNNGACATGCN
 A C G T A C G T C T G A A C T G A G T C C G T A G C A T A G T C C G T A T G A C A G T C C T G A C T A G A C T G A T C G C G T A C A G T A C T G A C G T A C G T
G T C A T C G A C T A G C T A G A G T C G T C A C G A T C T A G G A C T G A T C G A T C T C A G C T A G C T G A A G T C G C T A C A G T T C A G G A T C G A T C

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGCATCACYRGGSATG--
NGGGCATGTCTGGGCATGTT
 A C G T A C G T C T G A A C T G A G T C C G T A G C A T A G T C C G T A T G A C A G T C C T G A C T A G A C T G A T C G C G T A C A G T A C T G A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGCATCACYRGGSATG--
NGGGCATGTCTGGGCATGTT
 A C G T A C G T C T G A A C T G A G T C C G T A G C A T A G T C C G T A T G A C A G T C C T G A C T A G A C T G A T C G C G T A C A G T A C T G A C G T A C G T
G T C A C T A G C T A G C T G A A G T C G C T A C G A T A C T G G A C T G A T C G A C T C T A G C T A G C T G A T G A C G C T A C G A T T C A G G A C T G A T C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AGCATCACYRGGSATG-
---ATGCCCGGGCATGT
 C T G A A C T G A G T C C G T A G C A T A G T C C G T A T G A C A G T C C T G A C T A G A C T G A T C G C G T A C A G T A C T G A C G T
A C G T A C G T A C G T G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

PB0176.1_Sox5_2/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGCATCACYRGGSATG
TATCATAATTAAGGA--
 A C G T C T G A A C T G A G T C C G T A G C A T A G T C C G T A T G A C A G T C C T G A C T A G A C T G A T C G C G T A C A G T A C T G
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:8
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----AGCATCACYRGGSATG
TAGTGATCATCATTA------
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C C G T A G C A T A G T C C G T A T G A C A G T C C T G A C T A G A C T G A T C G C G T A C A G T A C T G
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:9
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-AGCATCACYRGGSATG
CAGCATGACTCAGCA--
 A C G T C T G A A C T G A G T C C G T A G C A T A G T C C G T A T G A C A G T C C T G A C T A G A C T G A T C G C G T A C A G T A C T G
G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:10
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--AGCATCACYRGGSATG
AAACMATTAN--------
 A C G T A C G T C T G A A C T G A G T C C G T A G C A T A G T C C G T A T G A C A G T C C T G A C T A G A C T G A T C G C G T A C A G T A C T G
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T