Information for 15-YGGGYCTSAGAGSCTG (Motif 23)

A G C T A C T G A T C G A T C G A G T C G A T C A C G T A T C G C G T A A T C G C G T A C T A G T A C G A G T C A G C T A C T G
Reverse Opposite:
T G A C C T G A A C T G A T G C A G T C A C G T A T G C C G A T T A G C G T C A C T A G C T A G A T G C A T G C G T A C C T G A
p-value:1e-8
log p-value:-1.861e+01
Information Content per bp:1.700
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif55.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets52.1 +/- 23.3bp
Average Position of motif in Background44.4 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:YGGGYCTSAGAGSCTG
----CTTGAGTGGCT-
 A G C T A C T G A T C G A T C G A G T C G A T C A C G T A T C G C G T A A T C G C G T A C T A G T A C G A G T C A G C T A C T G
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.49
Offset:9
Orientation:forward strand
Alignment:YGGGYCTSAGAGSCTG-
---------TWGTCTGV
 A G C T A C T G A T C G A T C G A G T C G A T C A C G T A T C G C G T A A T C G C G T A C T A G T A C G A G T C A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.49
Offset:5
Orientation:forward strand
Alignment:YGGGYCTSAGAGSCTG
-----TTGACAGC---
 A G C T A C T G A T C G A T C G A G T C G A T C A C G T A T C G C G T A A T C G C G T A C T A G T A C G A G T C A G C T A C T G
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:YGGGYCTSAGAGSCTG
--TGAGTGACAGSC--
 A G C T A C T G A T C G A T C G A G T C G A T C A C G T A T C G C G T A A T C G C G T A C T A G T A C G A G T C A G C T A C T G
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:YGGGYCTSAGAGSCTG
-------CACAGN---
 A G C T A C T G A T C G A T C G A G T C G A T C A C G T A T C G C G T A A T C G C G T A C T A G T A C G A G T C A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:YGGGYCTSAGAGSCTG
----VBTGWCAGCB--
 A G C T A C T G A T C G A T C G A G T C G A T C A C G T A T C G C G T A A T C G C G T A C T A G T A C G A G T C A G C T A C T G
A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:YGGGYCTSAGAGSCTG
-GNCTATAAAAGG---
 A G C T A C T G A T C G A T C G A G T C G A T C A C G T A T C G C G T A A T C G C G T A C T A G T A C G A G T C A G C T A C T G
A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.47
Offset:9
Orientation:forward strand
Alignment:YGGGYCTSAGAGSCTG
---------CAGCC--
 A G C T A C T G A T C G A T C G A G T C G A T C A C G T A T C G C G T A A T C G C G T A C T A G T A C G A G T C A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.46
Offset:9
Orientation:reverse strand
Alignment:YGGGYCTSAGAGSCTG-------
---------CAGGCCNNGGCCNN
 A G C T A C T G A T C G A T C G A G T C G A T C A C G T A T C G C G T A A T C G C G T A C T A G T A C G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.46
Offset:9
Orientation:forward strand
Alignment:YGGGYCTSAGAGSCTG---
---------GAGSCCGAGC
 A G C T A C T G A T C G A T C G A G T C G A T C A C G T A T C G C G T A A T C G C G T A C T A G T A C G A G T C A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C