Information for 7-GGGCCAGACWGGA (Motif 14)

A C T G A C T G A C T G G T A C A G T C C G T A A C T G G T C A G T A C C G A T C A T G A C T G C T G A
Reverse Opposite:
A G C T A G T C G T A C C G T A A C T G A C G T G T A C A C G T A C T G A C T G G T A C G T A C A G T C
p-value:1e-10
log p-value:-2.469e+01
Information Content per bp:1.832
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif29.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets73.3 +/- 13.6bp
Average Position of motif in Background50.7 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGGCCAGACWGGA--
CAAATCCAGACATCACA
 A C G T A C G T A C T G A C T G A C T G G T A C A G T C C G T A A C T G G T C A G T A C C G A T C A T G A C T G C T G A A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGGCCAGACWGGA
---CCAGACAG--
 A C T G A C T G A C T G G T A C A G T C C G T A A C T G G T C A G T A C C G A T C A T G A C T G C T G A
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGGCCAGACWGGA
AGGTGNCAGACAG--
 A C G T A C G T A C T G A C T G A C T G G T A C A G T C C G T A A C T G G T C A G T A C C G A T C A T G A C T G C T G A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGGCCAGACWGGA
AGGTGHCAGACA---
 A C G T A C G T A C T G A C T G A C T G G T A C A G T C C G T A A C T G G T C A G T A C C G A T C A T G A C T G C T G A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGGCCAGACWGGA
---CCAGACRSVB
 A C T G A C T G A C T G G T A C A G T C C G T A A C T G G T C A G T A C C G A T C A T G A C T G C T G A
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGCCAGACWGGA
ATGCCAGACN---
 A C T G A C T G A C T G G T A C A G T C C G T A A C T G G T C A G T A C C G A T C A T G A C T G C T G A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGGCCAGACWGGA
---BCAGACWA--
 A C T G A C T G A C T G G T A C A G T C C G T A A C T G G T C A G T A C C G A T C A T G A C T G C T G A
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAGACWGGA
CGTGCCAAG-----
 A C G T A C T G A C T G A C T G G T A C A G T C C G T A A C T G G T C A G T A C C G A T C A T G A C T G C T G A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGGCCAGACWGGA
-TGCCAA------
 A C T G A C T G A C T G G T A C A G T C C G T A A C T G G T C A G T A C C G A T C A T G A C T G C T G A
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGGCCAGACWGGA
GGACCACCCACG-
 A C T G A C T G A C T G G T A C A G T C C G T A A C T G G T C A G T A C C G A T C A T G A C T G C T G A
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T