Information for 1-GCACCATCGT (Motif 13)

A C T G G T A C C G T A T A G C G T A C G T C A A G C T A G T C T C A G A C G T
Reverse Opposite:
C G T A A G T C A C T G C T G A A C G T A C T G A T C G A C G T A C T G A G T C
p-value:1e-11
log p-value:-2.573e+01
Information Content per bp:1.857
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.62%
Number of Background Sequences with motif36.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.7 +/- 26.9bp
Average Position of motif in Background50.0 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GCACCATCGT
ADGGYAGYAGCATCT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A T A G C G T A C G T C A A G C T A G T C T C A G A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T

PH0044.1_Homez/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCACCATCGT-------
AAAACATCGTTTTTAAG
 A C T G G T A C C G T A T A G C G T A C G T C A A G C T A G T C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCACCATCGT---
---CCATTGTTYB
 A C T G G T A C C G T A T A G C G T A C G T C A A G C T A G T C T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCACCATCGT-
GGCTCYAKCAYC
 A C G T A C T G G T A C C G T A T A G C G T A C G T C A A G C T A G T C T C A G A C G T A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCACCATCGT-
---CCTTTGTT
 A C T G G T A C C G T A T A G C G T A C G T C A A G C T A G T C T C A G A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCACCATCGT
TTGCAACATN--
 A C G T A C G T A C T G G T A C C G T A T A G C G T A C G T C A A G C T A G T C T C A G A C G T
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCACCATCGT-----
NNNCCATTGTGTNAN
 A C T G G T A C C G T A T A G C G T A C G T C A A G C T A G T C T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCACCATCGT--
--NCCATTGTTY
 A C T G G T A C C G T A T A G C G T A C G T C A A G C T A G T C T C A G A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCACCATCGT--
---CCATTGTTC
 A C T G G T A C C G T A T A G C G T A C G T C A A G C T A G T C T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCACCATCGT---
---CCATTGTTTT
 A C T G G T A C C G T A T A G C G T A C G T C A A G C T A G T C T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T