Information for 1-GACACTTTGGGTC (Motif 1)

C T A G C T G A G T A C C G T A A G T C A C G T A C G T A C G T C A T G A C T G A C T G A C G T A G T C
Reverse Opposite:
C T A G C G T A G T A C A G T C G A T C C G T A C G T A C G T A A C T G A C G T A C T G A G C T A G T C
p-value:1e-16
log p-value:-3.855e+01
Information Content per bp:1.861
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.6 +/- 25.3bp
Average Position of motif in Background54.8 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GACACTTTGGGTC--
---ACTTTCGTTTCT
 C T A G C T G A G T A C C G T A A G T C A C G T A C G T A C G T C A T G A C T G A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

ELK1/MA0028.2/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GACACTTTGGGTC
--NACTTCCGGT-
 C T A G C T G A G T A C C G T A A G T C A C G T A C G T A C G T C A T G A C T G A C T G A C G T A G T C
A C G T A C G T G A T C T C G A A G T C C G A T A C G T T G A C T G A C A C T G A T C G G A C T A C G T

ETV3/MA0763.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GACACTTTGGGTC
--CACTTCCGGT-
 C T A G C T G A G T A C C G T A A G T C A C G T A C G T A C G T C A T G A C T G A C T G A C G T A G T C
A C G T A C G T A G T C T C G A A G T C C G A T C A G T G T A C G T A C C T A G C T A G A G C T A C G T

PB0020.1_Gabpa_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GACACTTTGGGTC---
NNNNACTTCCGGTATNN
 A C G T C T A G C T G A G T A C C G T A A G T C A C G T A C G T A C G T C A T G A C T G A C T G A C G T A G T C A C G T A C G T A C G T
A C G T C G A T C T G A G T A C C T G A A G T C C G A T C G A T A G T C A G T C A C T G A T C G G A C T C G T A C G A T A C G T C A T G

ERF/MA0760.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GACACTTTGGGTC
--CACTTCCGGT-
 C T A G C T G A G T A C C G T A A G T C A C G T A C G T A C G T C A T G A C T G A C T G A C G T A G T C
A C G T A C G T A G T C T C G A A G T C C G A T A C G T A T G C A G T C A C T G T C A G A G C T A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GACACTTTGGGTC-
NNGAGGTTACTNNAGGTCA
 A C G T A C G T A C G T A C G T A C G T C T A G C T G A G T A C C G T A A G T C A C G T A C G T A C G T C A T G A C T G A C T G A C G T A G T C A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GACACTTTGGGTC
ACCACTTAA----
 C T A G C T G A G T A C C G T A A G T C A C G T A C G T A C G T C A T G A C T G A C T G A C G T A G T C
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T

ETS(ETS)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GACACTTTGGGTC
---ACTTCCGGTT
 C T A G C T G A G T A C C G T A A G T C A C G T A C G T A C G T C A T G A C T G A C T G A C G T A G T C
A C G T A C G T A C G T C T G A A G T C C G A T C A G T A G T C A G T C C A T G A T C G A G C T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GACACTTTGGGTC
MRSCACTYAA----
 A C G T C T A G C T G A G T A C C G T A A G T C A C G T A C G T A C G T C A T G A C T G A C T G A C G T A G T C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T

ELK3/MA0759.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GACACTTTGGGTC
--NACTTCCGGT-
 C T A G C T G A G T A C C G T A A G T C A C G T A C G T A C G T C A T G A C T G A C T G A C G T A G T C
A C G T A C G T G A C T T C G A A G T C C G A T A C G T T G A C A G T C A C T G A C T G G A C T A C G T