Information for 4-CACCTATGCAGGCCTG (Motif 4)

A G T C C G T A A G T C A G T C A C G T C T G A A C G T A T C G A G T C C G T A A C T G A C T G G T A C A T G C A C G T A T C G
Reverse Opposite:
A T G C C G T A A T C G A C T G A G T C A G T C A C G T A C T G A T G C C G T A A G C T C G T A C T A G T C A G A C G T A C T G
p-value:1e-12
log p-value:-2.834e+01
Information Content per bp:1.911
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.5 +/- 25.4bp
Average Position of motif in Background43.7 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:CACCTATGCAGGCCTG
-------CNAGGCCT-
 A G T C C G T A A G T C A G T C A C G T C T G A A C G T A T C G A G T C C G T A A C T G A C T G G T A C A T G C A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CACCTATGCAGGCCTG
-------CTAGGCCT-
 A G T C C G T A A G T C A G T C A C G T C T G A A C G T A T C G A G T C C G T A A C T G A C T G G T A C A T G C A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CACCTATGCAGGCCTG
SCAGYCADGCATGAC--
 A C G T A G T C C G T A A G T C A G T C A C G T C T G A A C G T A T C G A G T C C G T A A C T G A C T G G T A C A T G C A C G T A T C G
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:CACCTATGCAGGCCTG------
--------CAGGCCNNGGCCNN
 A G T C C G T A A G T C A G T C A C G T C T G A A C G T A T C G A G T C C G T A A C T G A C T G G T A C A T G C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CACCTATGCAGGCCTG
GCAGCCAAGCGTGACN-
 A C G T A G T C C G T A A G T C A G T C A C G T C T G A A C G T A T C G A G T C C G T A A C T G A C T G G T A C A T G C A C G T A T C G
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C A C G T

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CACCTATGCAGGCCTG
TACACCTGTC--------
 A C G T A C G T A G T C C G T A A G T C A G T C A C G T C T G A A C G T A T C G A G T C C G T A A C T G A C T G G T A C A T G C A C G T A T C G
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CACCTATGCAGGCCTG
TGACACCT-----------
 A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C G T C T G A A C G T A T C G A G T C C G T A A C T G A C T G G T A C A T G C A C G T A T C G
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------CACCTATGCAGGCCTG
NNTNCGCACCTGTNGAN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C G T C T G A A C G T A T C G A G T C C G T A A C T G A C T G G T A C A T G C A C G T A T C G
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CACCTATGCAGGCCTG
AACACCTGCT--------
 A C G T A C G T A G T C C G T A A G T C A G T C A C G T C T G A A C G T A T C G A G T C C G T A A C T G A C T G G T A C A T G C A C G T A T C G
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CACCTATGCAGGCCTG
NCACCTGTN--------
 A C G T A G T C C G T A A G T C A G T C A C G T C T G A A C G T A T C G A G T C C G T A A C T G A C T G G T A C A T G C A C G T A T C G
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T