Information for 11-CTCTBTCTGTGGC (Motif 21)

A G T C A C G T A G T C G A C T A C G T A C G T A G T C C G A T A C T G A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A G T C C G T A A C T G C G T A T C G A C T G A A C T G C G T A A C T G
p-value:1e-7
log p-value:-1.837e+01
Information Content per bp:1.891
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 28.4bp
Average Position of motif in Background31.7 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CTCTBTCTGTGGC--
----GTCTGTGGTTT
 A G T C A C G T A G T C G A C T A C G T A C G T A G T C C G A T A C T G A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTCTBTCTGTGGC---
----NNHTGTGGTTWN
 A G T C A C G T A G T C G A C T A C G T A C G T A G T C C G A T A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTCTBTCTGTGGC--
-----GCTGTGGTTT
 A G T C A C G T A G T C G A C T A C G T A C G T A G T C C G A T A C T G A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCTBTCTGTGGC
CCCCCTGCTGTG--
 A C G T A G T C A C G T A G T C G A C T A C G T A C G T A G T C C G A T A C T G A C G T A C T G A C T G A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTCTBTCTGTGGC--
---RGTTAGTGCCCY
 A G T C A C G T A G T C G A C T A C G T A C G T A G T C C G A T A C T G A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCTBTCTGTGGC----
NTNNTTAAGTGGNTNAN
 A G T C A C G T A G T C G A C T A C G T A C G T A G T C C G A T A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTCTBTCTGTGGC--
-----NNTGTGGTTT
 A G T C A C G T A G T C G A C T A C G T A C G T A G T C C G A T A C T G A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCTBTCTGTGGC-
NNTCCTGCTGTGNNN
 A C G T A G T C A C G T A G T C G A C T A C G T A C G T A G T C C G A T A C T G A C G T A C T G A C T G A G T C A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTCTBTCTGTGGC
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A G T C A C G T A G T C G A C T A C G T A C G T A G T C C G A T A C T G A C G T A C T G A C T G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CTCTBTCTGTGGC---
------CTGTGGTTTN
 A G T C A C G T A G T C G A C T A C G T A C G T A G T C C G A T A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G