Information for 5-MTGGSTTTAY (Motif 20)

G T A C A C G T A C T G A C T G T A C G A C G T A C G T C G A T C G T A A G T C
Reverse Opposite:
C T A G A C G T C G T A C G T A G T C A A T G C A G T C A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.844e+01
Information Content per bp:1.826
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif75.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets54.0 +/- 31.2bp
Average Position of motif in Background52.4 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF2/MA0596.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:MTGGSTTTAY
ATGGGGTGAT
 G T A C A C G T A C T G A C T G T A C G A C G T A C G T C G A T C G T A A G T C
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:MTGGSTTTAY
ATGGGGTGAT
 G T A C A C G T A C T G A C T G T A C G A C G T A C G T C G A T C G T A A G T C
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:MTGGSTTTAY
-NGGGATTA-
 G T A C A C G T A C T G A C T G T A C G A C G T A C G T C G A T C G T A A G T C
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:MTGGSTTTAY----
--DGWTTTATGRCN
 G T A C A C G T A C T G A C T G T A C G A C G T A C G T C G A T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:MTGGSTTTAY--
GTGGCGTGACNG
 G T A C A C G T A C T G A C T G T A C G A C G T A C G T C G A T C G T A A G T C A C G T A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:MTGGSTTTAY
GTGGGGTGAT
 G T A C A C G T A C T G A C T G T A C G A C G T A C G T C G A T C G T A A G T C
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---MTGGSTTTAY
GGTCTGGCAT---
 A C G T A C G T A C G T G T A C A C G T A C T G A C T G T A C G A C G T A C G T C G A T C G T A A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:MTGGSTTTAY-
--GGGATTANN
 G T A C A C G T A C T G A C T G T A C G A C G T A C G T C G A T C G T A A G T C A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:MTGGSTTTAY-----
CTTTGTTTACTTTTN
 G T A C A C G T A C T G A C T G T A C G A C G T A C G T C G A T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:MTGGSTTTAY
--GGGATTAA
 G T A C A C G T A C T G A C T G T A C G A C G T A C G T C G A T C G T A A G T C
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A