Information for 8-TGRCWYMCTGMCTGRM (Motif 19)

A C G T A C T G T C G A G T A C G C T A A G C T G T A C A T G C A C G T A T C G G T C A G T A C A C G T A C T G C T A G G T A C
Reverse Opposite:
A C T G G A T C A G T C C G T A A C T G C A G T A T G C C G T A A T C G C A T G C T G A C G A T A C T G A G C T A G T C C G T A
p-value:1e-8
log p-value:-2.045e+01
Information Content per bp:1.801
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 18.5bp
Average Position of motif in Background58.4 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGRCWYMCTGMCTGRM
TGGCAGNCTGCCAG--
 A C G T A C T G T C G A G T A C G C T A A G C T G T A C A T G C A C G T A T C G G T C A G T A C A C G T A C T G C T A G G T A C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGRCWYMCTGMCTGRM
TGACCCAGTGACCTAC
 A C G T A C T G T C G A G T A C G C T A A G C T G T A C A T G C A C G T A T C G G T C A G T A C A C G T A C T G C T A G G T A C
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGRCWYMCTGMCTGRM
TTGGCANNNTGCCAAG-
 A C G T A C G T A C T G T C G A G T A C G C T A A G C T G T A C A T G C A C G T A T C G G T C A G T A C A C G T A C T G C T A G G T A C
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGRCWYMCTGMCTGRM
TTGGCATGGTGCCA---
 A C G T A C G T A C T G T C G A G T A C G C T A A G C T G T A C A T G C A C G T A T C G G T C A G T A C A C G T A C T G C T A G G T A C
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGRCWYMCTGMCTGRM
GAGCCTGGTACTGWGCCTGR-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A G T A C G C T A A G C T G T A C A T G C A C G T A T C G G T C A G T A C A C G T A C T G C T A G G T A C
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGRCWYMCTGMCTGRM
-GTCACGCTCNCTGA-
 A C G T A C T G T C G A G T A C G C T A A G C T G T A C A T G C A C G T A T C G G T C A G T A C A C G T A C T G C T A G G T A C
A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TGRCWYMCTGMCTGRM
-------CTGTCTGG-
 A C G T A C T G T C G A G T A C G C T A A G C T G T A C A T G C A C G T A T C G G T C A G T A C A C G T A C T G C T A G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:TGRCWYMCTGMCTGRM---
-------BTGABTGACAGS
 A C G T A C T G T C G A G T A C G C T A A G C T G T A C A T G C A C G T A T C G G T C A G T A C A C G T A C T G C T A G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TGRCWYMCTGMCTGRM----
---NNTNNTGTCTGGNNTNG
 A C G T A C T G T C G A G T A C G C T A A G C T G T A C A T G C A C G T A T C G G T C A G T A C A C G T A C T G C T A G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGRCWYMCTGMCTGRM
-----TGCTGACTCA-
 A C G T A C T G T C G A G T A C G C T A A G C T G T A C A T G C A C G T A T C G G T C A G T A C A C G T A C T G C T A G G T A C
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T