Information for 3-AGGTGCTGCC (Motif 18)

C T G A A T C G C T A G C A G T A T C G A G T C C G A T C A T G A G T C T G A C
Reverse Opposite:
A C T G T C A G G T A C G C T A T C A G T A G C G T C A G A T C T A G C G A C T
p-value:1e-9
log p-value:-2.086e+01
Information Content per bp:1.519
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.41%
Number of Background Sequences with motif548.6
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets40.4 +/- 22.9bp
Average Position of motif in Background51.2 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AGGTGCTGCC--
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C G T C T G A A T C G C T A G C A G T A T C G A G T C C G A T C A T G A G T C T G A C A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

TCF3/MA0522.2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGCTGCC
NNCAGGTGTN---
 A C G T A C G T A C G T C T G A A T C G C T A G C A G T A T C G A G T C C G A T C A T G A G T C T G A C
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGCTGCC
NNCAGGTGCG---
 A C G T A C G T A C G T C T G A A T C G C T A G C A G T A T C G A G T C C G A T C A T G A G T C T G A C
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGCTGCC
GACAGGTGTN---
 A C G T A C G T A C G T C T G A A T C G C T A G C A G T A T C G A G T C C G A T C A T G A G T C T G A C
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGCTGCC
SDGCAGGTGCNS--
 A C G T A C G T A C G T A C G T C T G A A T C G C T A G C A G T A T C G A G T C C G A T C A T G A G T C T G A C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGGTGCTGCC-
CAGCTGTTTCCT
 A C G T C T G A A T C G C T A G C A G T A T C G A G T C C G A T C A T G A G T C T G A C A C G T
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AGGTGCTGCC-
ATCCACAGGTGCGAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T C G C T A G C A G T A T C G A G T C C G A T C A T G A G T C T G A C A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGCTGCC
NNCAGGTGNN---
 A C G T A C G T A C G T C T G A A T C G C T A G C A G T A T C G A G T C C G A T C A T G A G T C T G A C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGGTGCTGCC
AACAGGTGT----
 A C G T A C G T A C G T C T G A A T C G C T A G C A G T A T C G A G T C C G A T C A T G A G T C T G A C
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGTGCTGCC-----
AGATGCTRCTRCCHT
 C T G A A T C G C T A G C A G T A T C G A G T C C G A T C A T G A G T C T G A C A C G T A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T