Information for 9-TTTTCTACGTGTA (Motif 9)

A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A A G T C A C T G A C G T C G T A A C T G C G T A C G T A C G T A C G T A
p-value:1e-7
log p-value:-1.670e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 21.4bp
Average Position of motif in Background55.8 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTTTCTACGTGTA------
ACCGCCNTCCACGTGTANNGACA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A T C G A T C C A T G T A G C G A T C G A C T C A G T T G A C G T A C C T G A A G T C T C A G G A C T A C T G A C G T G T C A C T G A G A C T T A C G C T G A G A T C C T G A

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTTCTACGTGTA----
NNTTTTACATGTANNNT
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTTCTACGTGTA----
ANTATTACATGTANNNN
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTCTACGTGTA----
ANTNNTACATGTANNTN
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0084.1_Irx3_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTCTACGTGTA----
NNTATTACATGTANNNT
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTCTACGTGTA----
ANTTNTACATGTANTTN
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTCTACGTGTA----
ANTNTTACATGTATNTA
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTTTCTACGTGTA
--GGGTACGTGC-
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C G T C G T A
A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTTTCTACGTGTA
ATTTTCCATT----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C G T C G T A
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTTTCTACGTGTA
----GGACGTGC-
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C G T C G T A
A C G T A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T