Information for 5-CACTTGGGAT (Motif 8)

A G T C C G T A A G T C A G C T A C G T C T A G A C T G A C T G C G T A A C G T
Reverse Opposite:
G T C A A C G T A G T C G T A C A G T C C G T A C T G A C T A G A C G T A C T G
p-value:1e-7
log p-value:-1.677e+01
Information Content per bp:1.910
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif69.3
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets61.2 +/- 22.5bp
Average Position of motif in Background47.7 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACTTGGGAT
ACCACTTGAA--
 A C G T A C G T A G T C C G T A A G T C A G C T A C G T C T A G A C T G A C T G C G T A A C G T
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CACTTGGGAT--
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G C T A C G T C T A G A C T G A C T G C G T A A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

Myc/MA0147.2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CACTTGGGAT
AAGCACATGG---
 A C G T A C G T A C G T A G T C C G T A A G T C A G C T A C G T C T A G A C T G A C T G C G T A A C G T
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CACTTGGGAT
CCACTTGAA--
 A C G T A G T C C G T A A G T C A G C T A C G T C T A G A C T G A C T G C G T A A C G T
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACTTGGGAT
NGTCCCNNGGGA-
 A C G T A C G T A C G T A G T C C G T A A G T C A G C T A C G T C T A G A C T G A C T G C G T A A C G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CACTTGGGAT
NNCCACGTGG---
 A C G T A C G T A C G T A G T C C G T A A G T C A G C T A C G T C T A G A C T G A C T G C G T A A C G T
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CACTTGGGAT
NNCCACGTGG---
 A C G T A C G T A C G T A G T C C G T A A G T C A G C T A C G T C T A G A C T G A C T G C G T A A C G T
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CACTTGGGAT-
TAAGCCACTTAACATT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G C T A C G T C T A G A C T G A C T G C G T A A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACTTGGGAT
MRSCACTYAA---
 A C G T A C G T A C G T A G T C C G T A A G T C A G C T A C G T C T A G A C T G A C T G C G T A A C G T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CACTTGGGAT
GTCACGTGGM--
 A C G T A C G T A G T C C G T A A G T C A G C T A C G T C T A G A C T G A C T G C G T A A C G T
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T