Information for 4-TATTCATATT (Motif 6)

A G C T C G T A C G A T C G A T A G T C C G T A A C G T C T G A A G C T A C G T
Reverse Opposite:
C G T A C T G A A G C T T G C A C G A T C T A G C G T A C G T A C G A T C T G A
p-value:1e-9
log p-value:-2.187e+01
Information Content per bp:1.841
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif114.9
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets49.6 +/- 24.3bp
Average Position of motif in Background46.6 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TATTCATATT
GAATATTCAT---
 A C G T A C G T A C G T A G C T C G T A C G A T C G A T A G T C C G T A A C G T C T G A A G C T A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TATTCATATT
GHATATKCAT---
 A C G T A C G T A C G T A G C T C G T A C G A T C G A T A G T C C G T A A C G T C T G A A G C T A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TATTCATATT--
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G A T C G A T A G T C C G T A A C G T C T G A A G C T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

PH0144.1_Pou2f2/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TATTCATATT---
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A G C T C G T A C G A T C G A T A G T C C G T A A C G T C T G A A G C T A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TATTCATATT---
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A G C T C G T A C G A T C G A T A G T C C G T A A C G T C T G A A G C T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TATTCATATT---
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A G C T C G T A C G A T C G A T A G T C C G T A A C G T C T G A A G C T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TATTCATATT
AATATGCAAATT
 A C G T A C G T A G C T C G T A C G A T C G A T A G T C C G T A A C G T C T G A A G C T A C G T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TATTCATATT---
ACATTCATGACACG
 A C G T A G C T C G T A C G A T C G A T A G T C C G T A A C G T C T G A A G C T A C G T A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

POU5F1B/MA0792.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TATTCATATT
TATGCAAAT-
 A G C T C G T A C G A T C G A T A G T C C G T A A C G T C T G A A G C T A C G T
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TATTCATATT-
TTATGCAAATTA
 A C G T A G C T C G T A C G A T C G A T A G T C C G T A A C G T C T G A A G C T A C G T A C G T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A