Information for 21-CCATGATCAT (Motif 40)

A G T C A G T C C G T A A C G T A C T G C G T A A C G T A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G C G T A A C G T A G T C C G T A A C G T A C T G A C T G
p-value:1e-2
log p-value:-5.156e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.3 +/- 17.2bp
Average Position of motif in Background41.3 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCATGATCAT-----
TAGTGATCATCATTA
 A G T C A G T C C G T A A C G T A C T G C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

PH0016.1_Cux1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCATGATCAT-----
TNAGNTGATCAACCGGT
 A C G T A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCATGATCAT
-CATGAC---
 A G T C A G T C C G T A A C G T A C T G C G T A A C G T A G T C C G T A A C G T
A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCATGATCAT-
TCAAGGTCATA
 A G T C A G T C C G T A A C G T A C T G C G T A A C G T A G T C C G T A A C G T A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCATGATCAT----
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrra/MA0592.2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCATGATCAT
TTCAAGGTCAT
 A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A G T C C G T A A C G T
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCATGATCAT----
NANTATTATAATTNNN
 A C G T A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCATGATCAT
TCAAGGTCAT
 A G T C A G T C C G T A A C G T A C T G C G T A A C G T A G T C C G T A A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCATGATCAT
NCGTGACN--
 A G T C A G T C C G T A A C G T A C T G C G T A A C G T A G T C C G T A A C G T
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCATGATCAT
BTCAAGGTCA-
 A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A G T C C G T A A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T