Information for 16-GTGACAAGSANRG (Motif 26)

T C A G C G A T A C T G C T G A T A G C T G C A T C G A C T A G T A G C G T C A C G A T C T G A C A T G
Reverse Opposite:
G T A C G A C T G C T A A C G T A T C G G A T C A G C T A C G T A T C G G A C T G T A C G C T A A G T C
p-value:1e-8
log p-value:-1.944e+01
Information Content per bp:1.524
Number of Target Sequences with motif129.0
Percentage of Target Sequences with motif23.24%
Number of Background Sequences with motif5572.5
Percentage of Background Sequences with motif14.00%
Average Position of motif in Targets48.1 +/- 25.9bp
Average Position of motif in Background49.4 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTGACAAGSANRG
AGGTGNCAGACAG--
 A C G T A C G T T C A G C G A T A C T G C T G A T A G C T G C A T C G A C T A G T A G C G T C A C G A T C T G A C A T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTGACAAGSANRG
TTGACAGG-----
 T C A G C G A T A C T G C T G A T A G C T G C A T C G A C T A G T A G C G T C A C G A T C T G A C A T G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GTGACAAGSANRG---
-AGAAAGTGAAAGTGA
 T C A G C G A T A C T G C T G A T A G C T G C A T C G A C T A G T A G C G T C A C G A T C T G A C A T G A C G T A C G T A C G T
A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GTGACAAGSANRG
-TBGCACGCAA--
 T C A G C G A T A C T G C T G A T A G C T G C A T C G A C T A G T A G C G T C A C G A T C T G A C A T G
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGACAAGSANRG
TTGACAG------
 T C A G C G A T A C T G C T G A T A G C T G C A T C G A C T A G T A G C G T C A C G A T C T G A C A T G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTGACAAGSANRG
GAATGACGAATAAC-
 A C G T A C G T T C A G C G A T A C T G C T G A T A G C T G C A T C G A C T A G T A G C G T C A C G A T C T G A C A T G
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTGACAAGSANRG
AGGTGHCAGACA---
 A C G T A C G T T C A G C G A T A C T G C T G A T A G C T G C A T C G A C T A G T A G C G T C A C G A T C T G A C A T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GTGACAAGSANRG
RHTGWCAR------
 A C G T T C A G C G A T A C T G C T G A T A G C T G C A T C G A C T A G T A G C G T C A C G A T C T G A C A T G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GTGACAAGSANRG
ARNTGACA-------
 A C G T A C G T T C A G C G A T A C T G C T G A T A G C T G C A T C G A C T A G T A G C G T C A C G A T C T G A C A T G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GTGACAAGSANRG-
--GAAAGTGAAAGT
 T C A G C G A T A C T G C T G A T A G C T G C A T C G A C T A G T A G C G T C A C G A T C T G A C A T G A C G T
A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T