Information for 14-TGCCTTGTCCTCCTTT (Motif 24)

A C G T A T C G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A G T C A G T C G A C T A G C T G A C T
Reverse Opposite:
C T G A C T G A C G T A C T A G A C T G C G T A A C T G A C T G C G T A G T A C C G T A C G T A A C T G A C T G A T G C G T C A
p-value:1e-8
log p-value:-2.071e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.2 +/- 20.8bp
Average Position of motif in Background43.5 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCCTTGTCCTCCTTT
TGCCTGCGYCMCCTT-
 A C G T A T C G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A G T C A G T C G A C T A G C T G A C T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGCCTTGTCCTCCTTT
GAGCCCTTGTCCCTAA--
 A C G T A C G T A C G T A T C G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A G T C A G T C G A C T A G C T G A C T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTTGTCCTCCTTT
TGACCTTGACCT-----
 A C G T A C G T A T C G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A G T C A G T C G A C T A G C T G A C T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGCCTTGTCCTCCTTT
----CNGTCCTCCC--
 A C G T A T C G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A G T C A G T C G A C T A G C T G A C T
A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTTGTCCTCCTTT
TGACCTTGACCT-----
 A C G T A C G T A T C G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A G T C A G T C G A C T A G C T G A C T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGCCTTGTCCTCCTTT
-CCATTGTTTT-----
 A C G T A T C G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A G T C A G T C G A C T A G C T G A C T
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGCCTTGTCCTCCTTT
-CCWTTGTYYB-----
 A C G T A T C G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A G T C A G T C G A C T A G C T G A C T
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGCCTTGTCCTCCTTT
-----TGACCTYA---
 A C G T A T C G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A G T C A G T C G A C T A G C T G A C T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGCCTTGTCCTCCTTT
-YCTTTGTTCC-----
 A C G T A T C G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A G T C A G T C G A C T A G C T G A C T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCCTTGTCCTCCTTT--
----TTGACCTANTTATN
 A C G T A T C G A G T C A G T C A C G T A C G T A C T G C G A T A G T C A G T C A C G T A G T C A G T C G A C T A G C T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A