Information for 2-TCACTGTCCT (Motif 18)

C G A T A T G C T G C A G A T C C G A T A T C G A G C T A T G C G A T C G C A T
Reverse Opposite:
C G T A C A T G T A C G T C G A T A G C G C T A C T A G A C G T T A C G G C T A
p-value:1e-10
log p-value:-2.399e+01
Information Content per bp:1.535
Number of Target Sequences with motif154.0
Percentage of Target Sequences with motif27.75%
Number of Background Sequences with motif6622.3
Percentage of Background Sequences with motif16.63%
Average Position of motif in Targets49.4 +/- 27.0bp
Average Position of motif in Background50.2 +/- 38.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TCACTGTCCT
NAGGTCANTGACCT
 A C G T A C G T A C G T A C G T C G A T A T G C T G C A G A T C C G A T A T C G A G C T A T G C G A T C G C A T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCACTGTCCT
CTCATTGTC--
 A C G T C G A T A T G C T G C A G A T C C G A T A T C G A G C T A T G C G A T C G C A T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCACTGTCCT
CCATTGTTTT
 C G A T A T G C T G C A G A T C C G A T A T C G A G C T A T G C G A T C G C A T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TCACTGTCCT--
----TGACCTYA
 C G A T A T G C T G C A G A T C C G A T A T C G A G C T A T G C G A T C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCACTGTCCT---
---CTGTTCCTGG
 C G A T A T G C T G C A G A T C C G A T A T C G A G C T A T G C G A T C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCACTGTCCT---
CAATCACTGGCAGAAT
 A C G T A C G T A C G T C G A T A T G C T G C A G A T C C G A T A T C G A G C T A T G C G A T C G C A T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.61
Offset:-9
Orientation:reverse strand
Alignment:---------TCACTGTCCT
GTTTTGCTTTCACTTTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T G C T G C A G A T C C G A T A T C G A G C T A T G C G A T C G C A T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCACTGTCCT
--GCTGTG--
 C G A T A T G C T G C A G A T C C G A T A T C G A G C T A T G C G A T C G C A T
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCACTGTCCT---
---CTGACCTTTG
 C G A T A T G C T G C A G A T C C G A T A T C G A G C T A T G C G A T C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCACTGTCCT
CCWTTGTYYB
 C G A T A T G C T G C A G A T C C G A T A T C G A G C T A T G C G A T C G C A T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G