Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 492)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 44026)	% of Background Sequences with Motif
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e-1	-3.130e+00	1.0000	13.0	2.64%	678.0	1.54%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-1	-3.108e+00	1.0000	4.0	0.81%	118.4	0.27%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e-1	-2.748e+00	1.0000	31.0	6.29%	2074.9	4.70%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-1	-2.387e+00	1.0000	6.0	1.22%	276.1	0.63%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e-1	-2.380e+00	1.0000	4.0	0.81%	152.0	0.34%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-2.247e+00	1.0000	1.0	0.20%	10.7	0.02%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.811e+00	1.0000	16.0	3.25%	1087.9	2.46%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-1.772e+00	1.0000	57.0	11.56%	4486.2	10.17%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-1.689e+00	1.0000	2.0	0.41%	70.3	0.16%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.630e+00	1.0000	22.0	4.46%	1610.0	3.65%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-1.629e+00	1.0000	4.0	0.81%	204.0	0.46%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-1.525e+00	1.0000	6.0	1.22%	361.0	0.82%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-1.446e+00	1.0000	4.0	0.81%	221.9	0.50%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-1.405e+00	1.0000	10.0	2.03%	689.8	1.56%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.379e+00	1.0000	6.0	1.22%	379.7	0.86%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.276e+00	1.0000	4.0	0.81%	239.7	0.54%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-1.205e+00	1.0000	23.0	4.67%	1817.1	4.12%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.115e+00	1.0000	13.0	2.64%	999.4	2.26%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.093e+00	1.0000	3.0	0.61%	183.2	0.42%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-1.068e+00	1.0000	2.0	0.41%	109.4	0.25%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-1.058e+00	1.0000	18.0	3.65%	1440.1	3.26%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-1.021e+00	1.0000	24.0	4.87%	1969.3	4.46%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-9.893e-01	1.0000	2.0	0.41%	116.2	0.26%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-9.769e-01	1.0000	17.0	3.45%	1381.4	3.13%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-9.682e-01	1.0000	2.0	0.41%	118.4	0.27%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-9.465e-01	1.0000	7.0	1.42%	534.0	1.21%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-9.277e-01	1.0000	2.0	0.41%	122.2	0.28%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-8.834e-01	1.0000	3.0	0.61%	210.0	0.48%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-8.696e-01	1.0000	5.0	1.01%	380.5	0.86%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	-8.526e-01	1.0000	2.0	0.41%	130.4	0.30%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-8.354e-01	1.0000	4.0	0.81%	301.5	0.68%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-8.215e-01	1.0000	3.0	0.61%	218.7	0.50%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-8.161e-01	1.0000	7.0	1.42%	564.1	1.28%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	-8.084e-01	1.0000	3.0	0.61%	220.1	0.50%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-7.757e-01	1.0000	8.0	1.62%	662.3	1.50%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-7.608e-01	1.0000	2.0	0.41%	141.9	0.32%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-7.408e-01	1.0000	10.0	2.03%	849.7	1.93%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-7.165e-01	1.0000	10.0	2.03%	857.2	1.94%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-7.085e-01	1.0000	27.0	5.48%	2377.6	5.39%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-7.039e-01	1.0000	9.0	1.83%	772.5	1.75%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-6.940e-01	1.0000	6.0	1.22%	507.9	1.15%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-6.916e-01	1.0000	41.0	8.32%	3639.7	8.25%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-6.677e-01	1.0000	4.0	0.81%	334.8	0.76%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-6.492e-01	1.0000	13.0	2.64%	1151.7	2.61%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-6.406e-01	1.0000	11.0	2.23%	974.0	2.21%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-6.403e-01	1.0000	5.0	1.01%	431.8	0.98%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-6.345e-01	1.0000	20.0	4.06%	1789.3	4.05%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-6.170e-01	1.0000	12.0	2.43%	1074.2	2.43%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-6.092e-01	1.0000	2.0	0.41%	163.3	0.37%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-6.064e-01	1.0000	5.0	1.01%	440.8	1.00%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-6.063e-01	1.0000	20.0	4.06%	1804.6	4.09%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-6.017e-01	1.0000	3.0	0.61%	257.5	0.58%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-5.828e-01	1.0000	4.0	0.81%	354.8	0.80%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-5.804e-01	1.0000	13.0	2.64%	1181.3	2.68%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-5.671e-01	1.0000	4.0	0.81%	358.1	0.81%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-5.662e-01	1.0000	6.0	1.22%	544.3	1.23%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-5.647e-01	1.0000	3.0	0.61%	265.8	0.60%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-5.627e-01	1.0000	2.0	0.41%	171.3	0.39%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-5.594e-01	1.0000	4.0	0.81%	361.0	0.82%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-5.493e-01	1.0000	24.0	4.87%	2201.5	4.99%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-5.330e-01	1.0000	11.0	2.23%	1019.6	2.31%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-5.161e-01	1.0000	21.0	4.26%	1948.0	4.41%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e0	-4.962e-01	1.0000	7.0	1.42%	662.4	1.50%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-4.929e-01	1.0000	5.0	1.01%	474.2	1.07%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-4.848e-01	1.0000	12.0	2.43%	1135.9	2.57%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-4.812e-01	1.0000	10.0	2.03%	950.7	2.15%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-4.809e-01	1.0000	12.0	2.43%	1137.8	2.58%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-4.748e-01	1.0000	1.0	0.20%	87.8	0.20%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-4.748e-01	1.0000	1.0	0.20%	87.3	0.20%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-4.748e-01	1.0000	4.0	0.81%	384.0	0.87%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-4.305e-01	1.0000	5.0	1.01%	496.1	1.12%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-4.300e-01	1.0000	1.0	0.20%	94.2	0.21%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-4.182e-01	1.0000	1.0	0.20%	96.4	0.22%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-4.149e-01	1.0000	3.0	0.61%	304.7	0.69%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-4.125e-01	1.0000	1.0	0.20%	97.7	0.22%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-4.068e-01	1.0000	1.0	0.20%	98.3	0.22%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-4.041e-01	1.0000	14.0	2.84%	1369.5	3.10%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-3.983e-01	1.0000	36.0	7.30%	3424.6	7.76%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-3.889e-01	1.0000	2.0	0.41%	209.7	0.48%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-3.870e-01	1.0000	19.0	3.85%	1852.3	4.20%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-3.870e-01	1.0000	18.0	3.65%	1758.1	3.98%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-3.774e-01	1.0000	6.0	1.22%	616.3	1.40%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-3.732e-01	1.0000	4.0	0.81%	419.9	0.95%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-3.550e-01	1.0000	1.0	0.20%	108.9	0.25%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-3.514e-01	1.0000	3.0	0.61%	325.9	0.74%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-3.410e-01	1.0000	4.0	0.81%	432.9	0.98%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-3.410e-01	1.0000	1.0	0.20%	111.1	0.25%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	-3.369e-01	1.0000	2.0	0.41%	224.1	0.51%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-3.325e-01	1.0000	6.0	1.22%	638.5	1.45%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-3.277e-01	1.0000	1.0	0.20%	114.7	0.26%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-3.171e-01	1.0000	3.0	0.61%	338.5	0.77%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e0	-3.156e-01	1.0000	6.0	1.22%	647.3	1.47%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-3.146e-01	1.0000	3.0	0.61%	339.3	0.77%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-3.015e-01	1.0000	5.0	1.01%	553.9	1.26%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-2.936e-01	1.0000	10.0	2.03%	1059.4	2.40%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-2.921e-01	1.0000	2.0	0.41%	239.1	0.54%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-2.863e-01	1.0000	11.0	2.23%	1163.6	2.64%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-2.850e-01	1.0000	13.0	2.64%	1360.9	3.08%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-2.742e-01	1.0000	9.0	1.83%	974.9	2.21%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-2.690e-01	1.0000	4.0	0.81%	466.7	1.06%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-2.649e-01	1.0000	19.0	3.85%	1961.9	4.45%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-2.632e-01	1.0000	2.0	0.41%	250.9	0.57%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-2.582e-01	1.0000	28.0	5.68%	2831.7	6.42%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-2.578e-01	1.0000	4.0	0.81%	472.6	1.07%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-2.560e-01	1.0000	1.0	0.20%	133.3	0.30%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-2.527e-01	1.0000	1.0	0.20%	134.0	0.30%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-2.498e-01	1.0000	3.0	0.61%	368.2	0.83%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-2.495e-01	1.0000	1.0	0.20%	135.4	0.31%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-2.395e-01	1.0000	2.0	0.41%	260.8	0.59%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	-2.336e-01	1.0000	31.0	6.29%	3150.7	7.14%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-2.327e-01	1.0000	10.0	2.03%	1108.4	2.51%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-2.284e-01	1.0000	1.0	0.20%	143.0	0.32%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-2.247e-01	1.0000	36.0	7.30%	3639.1	8.25%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-2.226e-01	1.0000	11.0	2.23%	1218.9	2.76%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-2.221e-01	1.0000	2.0	0.41%	268.3	0.61%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-2.210e-01	1.0000	17.0	3.45%	1815.1	4.11%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-2.156e-01	1.0000	9.0	1.83%	1022.3	2.32%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-2.121e-01	1.0000	12.0	2.43%	1329.3	3.01%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-2.102e-01	1.0000	12.0	2.43%	1332.0	3.02%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-2.084e-01	1.0000	7.0	1.42%	822.8	1.86%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-2.076e-01	1.0000	13.0	2.64%	1434.8	3.25%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-2.048e-01	1.0000	21.0	4.26%	2227.3	5.05%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-2.023e-01	1.0000	22.0	4.46%	2328.7	5.28%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-1.983e-01	1.0000	2.0	0.41%	281.0	0.64%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.972e-01	1.0000	5.0	1.01%	619.2	1.40%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-1.954e-01	1.0000	15.0	3.04%	1648.8	3.74%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.942e-01	1.0000	1.0	0.20%	155.6	0.35%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.938e-01	1.0000	6.0	1.22%	729.6	1.65%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-1.839e-01	1.0000	9.0	1.83%	1053.0	2.39%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-1.826e-01	1.0000	1.0	0.20%	160.1	0.36%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-1.739e-01	1.0000	2.0	0.41%	294.2	0.67%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-1.731e-01	1.0000	23.0	4.67%	2470.3	5.60%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-1.703e-01	1.0000	14.0	2.84%	1581.0	3.58%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-1.692e-01	1.0000	9.0	1.83%	1069.9	2.42%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.690e-01	1.0000	2.0	0.41%	297.8	0.67%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-1.658e-01	1.0000	21.0	4.26%	2285.1	5.18%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-1.645e-01	1.0000	19.0	3.85%	2089.8	4.74%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.622e-01	1.0000	6.0	1.22%	758.3	1.72%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-1.620e-01	1.0000	3.0	0.61%	422.0	0.96%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	-1.606e-01	1.0000	9.0	1.83%	1079.5	2.45%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.484e-01	1.0000	1.0	0.20%	177.9	0.40%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-1.466e-01	1.0000	1.0	0.20%	178.2	0.40%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-1.446e-01	1.0000	15.0	3.04%	1719.6	3.90%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.363e-01	1.0000	6.0	1.22%	786.1	1.78%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e0	-1.362e-01	1.0000	4.0	0.81%	561.1	1.27%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-1.347e-01	1.0000	1.0	0.20%	185.3	0.42%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e0	-1.295e-01	1.0000	7.0	1.42%	904.7	2.05%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.272e-01	1.0000	23.0	4.67%	2556.0	5.79%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-1.238e-01	1.0000	4.0	0.81%	574.3	1.30%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	-1.228e-01	1.0000	7.0	1.42%	913.9	2.07%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-1.206e-01	1.0000	21.0	4.26%	2369.0	5.37%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e0	-1.204e-01	1.0000	2.0	0.41%	333.7	0.76%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.193e-01	1.0000	2.0	0.41%	334.7	0.76%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	-1.150e-01	1.0000	4.0	0.81%	584.7	1.32%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-1.110e-01	1.0000	16.0	3.25%	1882.4	4.27%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.067e-01	1.0000	9.0	1.83%	1155.6	2.62%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-1.044e-01	1.0000	5.0	1.01%	714.3	1.62%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	-1.039e-01	1.0000	16.0	3.25%	1897.3	4.30%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-1.032e-01	1.0000	25.0	5.07%	2812.0	6.37%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-1.025e-01	1.0000	6.0	1.22%	831.2	1.88%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.018e-01	1.0000	3.0	0.61%	479.4	1.09%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-9.945e-02	1.0000	7.0	1.42%	948.6	2.15%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-9.908e-02	1.0000	14.0	2.84%	1700.9	3.85%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-9.611e-02	1.0000	3.0	0.61%	486.1	1.10%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-9.423e-02	1.0000	2.0	0.41%	359.9	0.82%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-9.356e-02	1.0000	7.0	1.42%	958.9	2.17%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	-9.302e-02	1.0000	6.0	1.22%	846.7	1.92%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-9.146e-02	1.0000	3.0	0.61%	492.8	1.12%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-9.090e-02	1.0000	9.0	1.83%	1184.5	2.68%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-8.988e-02	1.0000	2.0	0.41%	365.0	0.83%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-8.674e-02	1.0000	26.0	5.27%	2958.4	6.70%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-8.665e-02	1.0000	4.0	0.81%	622.7	1.41%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-8.328e-02	1.0000	6.0	1.22%	863.3	1.96%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-7.763e-02	1.0000	16.0	3.25%	1962.1	4.45%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-7.763e-02	1.0000	16.0	3.25%	1962.5	4.45%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-7.760e-02	1.0000	8.0	1.62%	1101.4	2.50%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-7.377e-02	1.0000	1.0	0.20%	236.8	0.54%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-7.262e-02	1.0000	7.0	1.42%	999.1	2.26%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-7.233e-02	1.0000	11.0	2.23%	1444.4	3.27%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-7.069e-02	1.0000	3.0	0.61%	523.2	1.19%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-6.781e-02	1.0000	5.0	1.01%	776.5	1.76%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-6.733e-02	1.0000	9.0	1.83%	1237.6	2.80%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-6.668e-02	1.0000	16.0	3.25%	1995.2	4.52%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-6.550e-02	1.0000	15.0	3.04%	1893.0	4.29%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-6.416e-02	1.0000	1.0	0.20%	248.6	0.56%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-6.264e-02	1.0000	34.0	6.90%	3849.7	8.72%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-6.064e-02	1.0000	6.0	1.22%	911.0	2.06%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-6.056e-02	1.0000	26.0	5.27%	3052.9	6.92%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-5.963e-02	1.0000	9.0	1.83%	1258.4	2.85%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-5.780e-02	1.0000	3.0	0.61%	547.4	1.24%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-5.715e-02	1.0000	1.0	0.20%	258.5	0.59%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-5.631e-02	1.0000	16.0	3.25%	2031.9	4.60%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-5.550e-02	1.0000	13.0	2.64%	1712.6	3.88%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-5.495e-02	1.0000	32.0	6.49%	3685.7	8.35%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-5.330e-02	1.0000	29.0	5.88%	3390.9	7.68%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-5.228e-02	1.0000	14.0	2.84%	1832.3	4.15%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-4.972e-02	1.0000	9.0	1.83%	1289.9	2.92%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e0	-4.926e-02	1.0000	16.0	3.25%	2059.9	4.67%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-4.827e-02	1.0000	9.0	1.83%	1294.5	2.93%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-4.806e-02	1.0000	1.0	0.20%	273.8	0.62%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-4.798e-02	1.0000	3.0	0.61%	569.9	1.29%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-4.758e-02	1.0000	17.0	3.45%	2173.8	4.93%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-4.754e-02	1.0000	8.0	1.62%	1182.6	2.68%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-4.640e-02	1.0000	5.0	1.01%	829.8	1.88%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-4.494e-02	1.0000	35.0	7.10%	4042.7	9.16%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-4.489e-02	1.0000	2.0	0.41%	437.1	0.99%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-4.412e-02	1.0000	20.0	4.06%	2508.0	5.68%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-4.247e-02	1.0000	4.0	0.81%	715.2	1.62%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-4.203e-02	1.0000	14.0	2.84%	1876.0	4.25%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-4.139e-02	1.0000	14.0	2.84%	1878.4	4.26%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-4.102e-02	1.0000	11.0	2.23%	1548.3	3.51%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-3.988e-02	1.0000	26.0	5.27%	3156.0	7.15%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-3.843e-02	1.0000	33.0	6.69%	3882.6	8.80%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-3.755e-02	1.0000	5.0	1.01%	858.3	1.94%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-3.678e-02	1.0000	38.0	7.71%	4399.6	9.97%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-3.660e-02	1.0000	19.0	3.85%	2442.8	5.54%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-3.579e-02	1.0000	7.0	1.42%	1109.6	2.51%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-3.508e-02	1.0000	23.0	4.67%	2874.1	6.51%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-3.485e-02	1.0000	1.0	0.20%	301.5	0.68%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-3.431e-02	1.0000	35.0	7.10%	4115.3	9.32%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-3.385e-02	1.0000	9.0	1.83%	1353.2	3.07%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-3.368e-02	1.0000	1.0	0.20%	304.0	0.69%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-3.180e-02	1.0000	1.0	0.20%	309.7	0.70%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-3.073e-02	1.0000	1.0	0.20%	312.3	0.71%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-3.031e-02	1.0000	19.0	3.85%	2482.5	5.63%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-3.020e-02	1.0000	3.0	0.61%	623.0	1.41%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-2.970e-02	1.0000	7.0	1.42%	1137.4	2.58%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-2.825e-02	1.0000	6.0	1.22%	1022.5	2.32%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-2.819e-02	1.0000	10.0	2.03%	1499.2	3.40%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-2.670e-02	1.0000	6.0	1.22%	1030.8	2.34%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-2.498e-02	1.0000	36.0	7.30%	4300.6	9.74%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-2.398e-02	1.0000	4.0	0.81%	787.6	1.78%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-2.189e-02	1.0000	15.0	3.04%	2110.3	4.78%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-2.124e-02	1.0000	4.0	0.81%	802.2	1.82%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-2.073e-02	1.0000	4.0	0.81%	805.6	1.83%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-2.005e-02	1.0000	8.0	1.62%	1317.2	2.98%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-1.970e-02	1.0000	3.0	0.61%	672.5	1.52%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-1.962e-02	1.0000	23.0	4.67%	3003.1	6.80%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-1.921e-02	1.0000	14.0	2.84%	2022.7	4.58%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-1.911e-02	1.0000	4.0	0.81%	816.0	1.85%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-1.676e-02	1.0000	9.0	1.83%	1465.2	3.32%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	-1.625e-02	1.0000	2.0	0.41%	542.1	1.23%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-1.540e-02	1.0000	36.0	7.30%	4422.4	10.02%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.538e-02	1.0000	7.0	1.42%	1233.7	2.80%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.461e-02	1.0000	5.0	1.01%	983.3	2.23%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-1.445e-02	1.0000	6.0	1.22%	1115.5	2.53%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-1.418e-02	1.0000	1.0	0.20%	381.0	0.86%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.309e-02	1.0000	1.0	0.20%	387.5	0.88%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-1.295e-02	1.0000	18.0	3.65%	2543.1	5.76%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-1.272e-02	1.0000	10.0	2.03%	1628.1	3.69%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-1.182e-02	1.0000	1.0	0.20%	396.3	0.90%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-1.177e-02	1.0000	3.0	0.61%	730.7	1.66%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-1.017e-02	1.0000	10.0	2.03%	1663.4	3.77%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-9.958e-03	1.0000	5.0	1.01%	1033.0	2.34%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-9.820e-03	1.0000	19.0	3.85%	2707.1	6.13%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-9.727e-03	1.0000	11.0	2.23%	1791.0	4.06%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-9.322e-03	1.0000	18.0	3.65%	2605.1	5.90%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-9.077e-03	1.0000	26.0	5.27%	3489.8	7.91%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-8.861e-03	1.0000	28.0	5.68%	3710.0	8.41%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-8.646e-03	1.0000	25.0	5.07%	3392.0	7.69%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-7.918e-03	1.0000	17.0	3.45%	2522.7	5.72%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-6.869e-03	1.0000	16.0	3.25%	2433.7	5.51%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-6.518e-03	1.0000	27.0	5.48%	3666.6	8.31%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-6.160e-03	1.0000	16.0	3.25%	2452.2	5.56%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-5.661e-03	1.0000	1.0	0.20%	461.1	1.04%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-4.567e-03	1.0000	8.0	1.62%	1531.9	3.47%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-4.216e-03	1.0000	32.0	6.49%	4296.5	9.74%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-3.804e-03	1.0000	10.0	2.03%	1811.1	4.10%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-3.512e-03	1.0000	58.0	11.76%	7042.9	15.96%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-2.733e-03	1.0000	17.0	3.45%	2707.9	6.14%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-2.656e-03	1.0000	13.0	2.64%	2235.5	5.07%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-2.592e-03	1.0000	1.0	0.20%	530.3	1.20%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-2.073e-03	1.0000	3.0	0.61%	919.0	2.08%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-1.960e-03	1.0000	47.0	9.53%	6050.4	13.71%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-1.884e-03	1.0000	10.0	2.03%	1912.2	4.33%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-1.823e-03	1.0000	14.0	2.84%	2415.9	5.47%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.674e-03	1.0000	4.0	0.81%	1100.7	2.49%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.652e-03	1.0000	91.0	18.46%	10526.9	23.85%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.342e-03	1.0000	2.0	0.41%	791.1	1.79%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.229e-03	1.0000	45.0	9.13%	5943.6	13.47%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-1.193e-03	1.0000	35.0	7.10%	4879.7	11.06%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	-1.165e-03	1.0000	15.0	3.04%	2607.0	5.91%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-1.110e-03	1.0000	28.0	5.68%	4122.8	9.34%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.008e-03	1.0000	6.0	1.22%	1455.4	3.30%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-9.670e-04	1.0000	10.0	2.03%	2005.1	4.54%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-8.470e-04	1.0000	8.0	1.62%	1756.9	3.98%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-8.030e-04	1.0000	19.0	3.85%	3145.7	7.13%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-6.630e-04	1.0000	33.0	6.69%	4774.6	10.82%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-5.220e-04	1.0000	22.0	4.46%	3569.1	8.09%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-4.080e-04	1.0000	11.0	2.23%	2254.9	5.11%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-4.070e-04	1.0000	5.0	1.01%	1413.2	3.20%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-3.960e-04	1.0000	11.0	2.23%	2258.5	5.12%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-3.950e-04	1.0000	13.0	2.64%	2517.5	5.70%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-3.740e-04	1.0000	9.0	1.83%	1998.4	4.53%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-3.620e-04	1.0000	38.0	7.71%	5439.6	12.33%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-3.450e-04	1.0000	3.0	0.61%	1106.1	2.51%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-3.000e-04	1.0000	4.0	0.81%	1289.2	2.92%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-2.530e-04	1.0000	25.0	5.07%	4040.1	9.15%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	-2.310e-04	1.0000	3.0	0.61%	1147.7	2.60%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-2.130e-04	1.0000	66.0	13.39%	8513.3	19.29%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-7.100e-05	1.0000	23.0	4.67%	4007.2	9.08%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-6.600e-05	1.0000	39.0	7.91%	5863.8	13.29%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-6.300e-05	1.0000	10.0	2.03%	2362.6	5.35%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-5.300e-05	1.0000	43.0	8.72%	6346.9	14.38%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-4.100e-05	1.0000	3.0	0.61%	1320.9	2.99%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-2.600e-05	1.0000	55.0	11.16%	7784.6	17.64%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-2.000e-05	1.0000	66.0	13.39%	8997.8	20.39%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.000e-05	1.0000	6.0	1.22%	1979.8	4.49%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-3.000e-06	1.0000	27.0	5.48%	4971.2	11.26%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	62.8	0.14%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	207.2	0.47%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	0.000e+00	1.0000	0.0	0.00%	275.3	0.62%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	0.000e+00	1.0000	0.0	0.00%	137.9	0.31%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	13.8	0.03%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	0.000e+00	1.0000	0.0	0.00%	126.5	0.29%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	135.9	0.31%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	23.2	0.05%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	60.3	0.14%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	0.000e+00	1.0000	0.0	0.00%	442.3	1.00%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	198.9	0.45%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	98.5	0.22%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	15.0	0.03%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	0.000e+00	1.0000	0.0	0.00%	82.5	0.19%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	0.000e+00	1.0000	0.0	0.00%	159.9	0.36%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	0.000e+00	1.0000	0.0	0.00%	159.1	0.36%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	0.000e+00	1.0000	0.0	0.00%	127.0	0.29%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	0.000e+00	1.0000	0.0	0.00%	141.5	0.32%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	15.6	0.04%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	0.000e+00	1.0000	0.0	0.00%	90.7	0.21%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	51.1	0.12%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	0.000e+00	1.0000	0.0	0.00%	162.6	0.37%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	0.000e+00	1.0000	0.0	0.00%	246.9	0.56%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	0.000e+00	1.0000	0.0	0.00%	275.8	0.62%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	0.000e+00	1.0000	0.0	0.00%	271.5	0.62%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	545.8	1.24%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	42.8	0.10%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	0.000e+00	1.0000	0.0	0.00%	58.7	0.13%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	52.7	0.12%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	29.5	0.07%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	11.1	0.03%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	0.000e+00	1.0000	0.0	0.00%	81.7	0.19%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	11.1	0.03%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	0.000e+00	1.0000	0.0	0.00%	81.7	0.19%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	0.000e+00	1.0000	0.0	0.00%	34.3	0.08%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	31.2	0.07%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	37.2	0.08%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	0.000e+00	1.0000	0.0	0.00%	324.2	0.73%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	24.8	0.06%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	32.5	0.07%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	0.000e+00	1.0000	0.0	0.00%	266.1	0.60%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	0.000e+00	1.0000	0.0	0.00%	137.0	0.31%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	0.000e+00	1.0000	0.0	0.00%	446.6	1.01%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	19.2	0.04%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	0.000e+00	1.0000	0.0	0.00%	127.8	0.29%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	0.000e+00	1.0000	0.0	0.00%	57.7	0.13%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	1.9	0.00%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	0.000e+00	1.0000	0.0	0.00%	260.2	0.59%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	132.0	0.30%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	3.0	0.01%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	0.000e+00	1.0000	0.0	0.00%	44.1	0.10%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	53.4	0.12%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	13.3	0.03%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	0.000e+00	1.0000	0.0	0.00%	69.1	0.16%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	0.000e+00	1.0000	0.0	0.00%	344.2	0.78%