p-value: | 1e-7 |
log p-value: | -1.841e+01 |
Information Content per bp: | 1.919 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.81% |
Number of Background Sequences with motif | 2.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 69.2 +/- 7.6bp |
Average Position of motif in Background | 58.8 +/- 3.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer
Match Rank: | 1 |
Score: | 0.86 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGGGGAATTCCCT GGGGGAATCCCC- |
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NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer
Match Rank: | 2 |
Score: | 0.84 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGGGGAATTCCCT NGGGGATTTCCC- |
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NFKB2/MA0778.1/Jaspar
Match Rank: | 3 |
Score: | 0.83 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGGGGAATTCCCT AGGGGAATCCCCT |
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NFKB1/MA0105.4/Jaspar
Match Rank: | 4 |
Score: | 0.79 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGGGGAATTCCCT AGGGGATTCCCCT |
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NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer
Match Rank: | 5 |
Score: | 0.77 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGGGGAATTCCCT --GGGAATTTCC- |
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REL/MA0101.1/Jaspar
Match Rank: | 6 |
Score: | 0.77 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGGGGAATTCCCT -GGGGATTTCC-- |
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MF0003.1_REL_class/Jaspar
Match Rank: | 7 |
Score: | 0.76 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGGGGAATTCCCT -GGGGATTTCC-- |
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RELA/MA0107.1/Jaspar
Match Rank: | 8 |
Score: | 0.75 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GGGGGAATTCCCT --GGGAATTTCC- |
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PB0204.1_Zfp740_2/Jaspar
Match Rank: | 9 |
Score: | 0.65 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------GGGGGAATTCCCT ANTNCCGGGGGGAANTT--- |
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TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 10 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GGGGGAATTCCCT- ----GCATTCCAGN |
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