Information for 13-WTGWCCYRGGTCA (Motif 19)

C G T A C G A T A C T G C G T A A G T C A G T C A G C T C T A G A C T G C T A G C G A T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C A G T C A G T C C T G A A C T G A C T G C G A T A G T C C G T A C G A T
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.6 +/- 28.5bp
Average Position of motif in Background78.2 +/- 9.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.70
Offset:7
Orientation:forward strand
Alignment:WTGWCCYRGGTCA
-------AGGTCA
 C G T A C G A T A C T G C G T A A G T C A G T C A G C T C T A G A C T G C T A G C G A T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:WTGWCCYRGGTCA----
-CGCGCCGGGTCACGTA
 C G T A C G A T A C T G C G T A A G T C A G T C A G C T C T A G A C T G C T A G C G A T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:WTGWCCYRGGTCA----
-AGAGCGGGGTCAAGTA
 C G T A C G A T A C T G C G T A A G T C A G T C A G C T C T A G A C T G C T A G C G A T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

RORA/MA0071.1/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:forward strand
Alignment:WTGWCCYRGGTCA
---ATCAAGGTCA
 C G T A C G A T A C T G C G T A A G T C A G T C A G C T C T A G A C T G C T A G C G A T A G T C C G T A
A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:WTGWCCYRGGTCA
---AAYTAGGTCA
 C G T A C G A T A C T G C G T A A G T C A G T C A G C T C T A G A C T G C T A G C G A T A G T C C G T A
A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:WTGWCCYRGGTCA-
----CAAAGGTCAG
 C G T A C G A T A C T G C G T A A G T C A G T C A G C T C T A G A C T G C T A G C G A T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.64
Offset:5
Orientation:forward strand
Alignment:WTGWCCYRGGTCA
-----TRAGGTCA
 C G T A C G A T A C T G C G T A A G T C A G T C A G C T C T A G A C T G C T A G C G A T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:WTGWCCYRGGTCA-
----TCAAGGTCAN
 C G T A C G A T A C T G C G T A A G T C A G T C A G C T C T A G A C T G C T A G C G A T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.63
Offset:5
Orientation:forward strand
Alignment:WTGWCCYRGGTCA
-----AGRGGTCA
 C G T A C G A T A C T G C G T A A G T C A G T C A G C T C T A G A C T G C T A G C G A T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:forward strand
Alignment:WTGWCCYRGGTCA----
----CAAAGGTCAAGGG
 C G T A C G A T A C T G C G T A A G T C A G T C A G C T C T A G A C T G C T A G C G A T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G