Information for 12-TCCAYCCAGT (Motif 13)

A C G T A T G C G T A C G C T A A G T C G A T C G T A C C G T A C T A G C A G T
Reverse Opposite:
G T C A G A T C G C A T C A T G C T A G T C A G C G A T C A T G A T C G T G C A
p-value:1e-10
log p-value:-2.402e+01
Information Content per bp:1.669
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif153.6
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets43.4 +/- 32.2bp
Average Position of motif in Background52.9 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TCCAYCCAGT--
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C G C T A A G T C G A T C G T A C C G T A C T A G C A G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCCAYCCAGT
ATCCAC-----
 A C G T A C G T A T G C G T A C G C T A A G T C G A T C G T A C C G T A C T A G C A G T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCCAYCCAGT
GGACCACCCACG
 A C G T A C G T A C G T A T G C G T A C G C T A A G T C G A T C G T A C C G T A C T A G C A G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

SREBF2/MA0596.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCCAYCCAGT
ATCACCCCAT-
 A C G T A C G T A T G C G T A C G C T A A G T C G A T C G T A C C G T A C T A G C A G T
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCCAYCCAGT--
ACTAGCCAATCA
 A C G T A T G C G T A C G C T A A G T C G A T C G T A C C G T A C T A G C A G T A C G T A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCCAYCCAGT
ATCACCCCAC-
 A C G T A C G T A T G C G T A C G C T A A G T C G A T C G T A C C G T A C T A G C A G T
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCCAYCCAGT
ATCACCCCAT-
 A C G T A C G T A T G C G T A C G C T A A G T C G A T C G T A C C G T A C T A G C A G T
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TCCAYCCAGT---
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A T G C G T A C G C T A A G T C G A T C G T A C C G T A C T A G C A G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCCAYCCAGT
CCATCAATCAAA-
 A C G T A C G T A C G T A C G T A T G C G T A C G C T A A G T C G A T C G T A C C G T A C T A G C A G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCCAYCCAGT
CNGTCACGCCAC-
 A C G T A C G T A C G T A C G T A T G C G T A C G C T A A G T C G A T C G T A C C G T A C T A G C A G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T