Information for 3-MATTRRMWTRAWSCTT (Motif 4)

G T A C G T C A A C G T A C G T C T A G C T G A G T A C C G T A A G C T C T G A C G T A C G A T A T C G A G T C A C G T A C G T
Reverse Opposite:
G T C A C G T A A C T G A T G C C G T A A C G T A G C T C T G A C G A T A C T G A G C T A G T C C G T A C G T A A C G T A C T G
p-value:1e-13
log p-value:-3.053e+01
Information Content per bp:1.803
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 17.7bp
Average Position of motif in Background52.5 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F3/MA0788.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-MATTRRMWTRAWSCTT
AAATTAGCATAAT----
 A C G T G T A C G T C A A C G T A C G T C T A G C T G A G T A C C G T A A G C T C T G A C G T A C G A T A T C G A G T C A C G T A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T A C G T A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-MATTRRMWTRAWSCTT
TAATTTGCATAA-----
 A C G T G T A C G T C A A C G T A C G T C T A G C T G A G T A C C G T A A G C T C T G A C G T A C G A T A T C G A G T C A C G T A C G T
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-MATTRRMWTRAWSCTT
TAATTTGCATAA-----
 A C G T G T A C G T C A A C G T A C G T C T A G C T G A G T A C C G T A A G C T C T G A C G T A C G A T A T C G A G T C A C G T A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:MATTRRMWTRAWSCTT
AATTTGCATANT----
 G T A C G T C A A C G T A C G T C T A G C T G A G T A C C G T A A G C T C T G A C G T A C G A T A T C G A G T C A C G T A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--MATTRRMWTRAWSCTT
CTAATTTGCATATT----
 A C G T A C G T G T A C G T C A A C G T A C G T C T A G C T G A G T A C C G T A A G C T C T G A C G T A C G A T A T C G A G T C A C G T A C G T
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T A C G T A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-MATTRRMWTRAWSCTT
TAATTAAATTA------
 A C G T G T A C G T C A A C G T A C G T C T A G C T G A G T A C C G T A A G C T C T G A C G T A C G A T A T C G A G T C A C G T A C G T
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:MATTRRMWTRAWSCTT
-ATTTGCATA------
 G T A C G T C A A C G T A C G T C T A G C T G A G T A C C G T A A G C T C T G A C G T A C G A T A T C G A G T C A C G T A C G T
A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--MATTRRMWTRAWSCTT
BTVATTWGCATA------
 A C G T A C G T G T A C G T C A A C G T A C G T C T A G C T G A G T A C C G T A A G C T C T G A C G T A C G A T A T C G A G T C A C G T A C G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-MATTRRMWTRAWSCTT
TAATTAAATTA------
 A C G T G T A C G T C A A C G T A C G T C T A G C T G A G T A C C G T A A G C T C T G A C G T A C G A T A T C G A G T C A C G T A C G T
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--MATTRRMWTRAWSCTT
CTCATTTGCATW------
 A C G T A C G T G T A C G T C A A C G T A C G T C T A G C T G A G T A C C G T A A G C T C T G A C G T A C G A T A T C G A G T C A C G T A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T